General information
PDB ID 5T7X
Title CRYSTAL STRUCTURE OF HHV-4 EBNA1 DNA BINDING DOMAIN (PATIENT-DERIVED, NASOPHARYNGEAL CARCINOMA) BOUND TO DNA
PDB header DNA BINDING PROTEIN/DNA
Date 2016-09-06
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.35
Kind dna
Organism HUMAN HERPESVIRUS 4 (STRAIN B95-8)
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5t7x.pdb AB CD 0
Biounits:
5t7x.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
EBV-NA1 Domain Q3KSS4_461-606 8.3e-100 1 No_clan A 461 606 CD  H-Bb H-Mj S-Bb L-Bb L-Mn 
EBV-NA1 Domain Q3KSS4_461-606 8.8e-100 1 No_clan B 461 606 CD  H-Bb H-Mj S-Bb L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=459-607 C host cell nucleus
A/B=459-607 F DNA binding
A/B=459-607 F DNA-binding transcription factor activity
A/B=459-607 F identical protein binding
A/B=459-607 P positive regulation of transcription, DNA-templated
A/B=459-607 P regulation of DNA replication
A/B=459-607 P suppression by virus of host adaptive immune response
A/B=459-607 P suppression by virus of host antigen processing and presentation
A/B=459-607 P suppression by virus of host NF-kappaB transcription factor activity
A/B=459-607 P viral latency
Sequences
Download file with secondary structure created by Stride  
5t7x.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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