General information
PDB ID 5TJG
Title THERMUS AQUATICUS DELTA1.1-SIGMAA HOLOENZYME/DOWNSTREAM-FORK PROMOTER COMPLEX WITH AN OPEN CLAMP
PDB header TRANSFERASE/DNA
Date 2016-10-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind dna
Organism THERMUS AQUATICUS, ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5tjg.pdb ABCDEF G 0
Biounits:
5tjg.pdb1.pdb ABCDEF G 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNA_pol_A_bac Domain Q9KWU8_52-179 3.7e-26 1 No_clan A 52 180   
RNA_pol_L Domain Q9KWU8_26-222 2.8e-24 1 CL0509 A 26 222   
RNA_pol_A_bac Domain Q9KWU8_52-179 3.7e-26 1 No_clan B 52 180   
RNA_pol_L Domain Q9KWU8_26-222 2.8e-24 1 CL0509 B 26 222   
RNA_pol_Rpb2_6 Domain Q9KWU7_596-1026 8.4e-149 1 CL0410 C 596 1026   
RNA_pol_Rpb2_3 Domain Q9KWU7_393-461 4.1e-29 1 No_clan C 393 461   
RNA_pol_Rpb2_7 Domain Q9KWU7_1028-1104 2e-26 1 No_clan C 1028 1104   
RNA_pol_Rpb2_45 Domain Q9KWU7_471-535 7.4e-24 1 No_clan C 471 535   
RNA_pol_Rpb2_2 Domain Q9KWU7_142-334 0.000000000043 1 No_clan C 142 334   
RNA_pol_Rpb1_1 Domain Q9KWU6_423-618 2.7e-46 1 No_clan D 423 618   
RNA_pol_Rpb1_2 Domain Q9KWU6_620-765 6.4e-36 1 No_clan D 620 765   
RNA_pol_Rpb1_1 Domain Q9KWU6_2-192 1.4e-33 1 No_clan D 2 192   
RNA_pol_Rpb1_3 Domain Q9KWU6_768-954 7.7e-30 1 No_clan D 768 954   
RNA_pol_Rpb1_5 Domain Q9KWU6_1064-1291 4.5e-22 1 No_clan D 1064 1254   
RNA_pol_Rpb1_4 Domain Q9KWU6_983-1069 0.0000000000000061 1 No_clan D 983 1068   
RNA_pol_Rpb1_5 Domain Q9KWU6_1269-1432 0.00000000000026 1 No_clan D 1261 1432   
Sigma70_r2 Domain Q9EZJ8_202-272 2.8e-20 1 CL0123 F 202 272 G   
Sigma70_r4 Domain Q9EZJ8_372-425 1.7e-18 1 CL0123 F 372 425   
RNA_pol_Rpb2_1 Family Q9KWU7_17-380 2.9e-40 1 No_clan C 17 380   
RNA_pol_Rpb6 Family Q9EVV4_8-75 0.00000045 1 No_clan E 8 75   
Sigma70_r3 Family Q9EZJ8_281-360 3.6e-26 1 CL0123 F 281 360   
Sigma70_r1_2 Family Q9EZJ8_94-127 3.8e-16 1 No_clan F 94 127 G   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5tjg.pdb1.pdb:   [ download sequences in FASTA format ]
G (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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