General information
PDB ID 5U1C
Title STRUCTURE OF TETRAMERIC HIV-1 STRAND TRANSFER COMPLEX INTASOME
PDB header VIRAL PROTEIN
Date 2016-11-28
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.9
Kind dna
Organism HOMO SAPIENS, HUMAN IMMUNODEFICIENCY VIRUS 1, HUMAN IMMUNODEFICIENCY VIRUS 1, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5u1c.pdb ABCD GEFHIJ 0
Biounits:
5u1c.pdb1.pdb ABCD GEFHIJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
IN_DBD_C Domain Q76353_223-268 1.5e-18 1 No_clan A 204 268 FIJ  H-Bb S-Bb 
rve Domain Q76353_55-162 2.8e-18 1 CL0219 A 55 162 FGIJ  H-Bb H-Mj H-Mn L-Bb 
Integrase_Zn Domain Q76353_8-45 2e-15 1 No_clan A 8 45   
IN_DBD_C Domain Q76353_223-268 2.5e-19 1 No_clan B 204 268 EI  S-Bb L-Bb 
rve Domain Q76353_55-162 6.1e-10 1 CL0219 B 56 160   
IN_DBD_C Domain Q76353_223-268 1.5e-18 1 No_clan C 204 268 EFJ  H-Bb S-Bb 
rve Domain Q76353_55-162 2.8e-18 1 CL0219 C 55 162 EFHJ  H-Bb H-Mj H-Mn L-Bb 
Integrase_Zn Domain Q76353_8-45 2e-15 1 No_clan C 8 45   
IN_DBD_C Domain Q76353_223-268 2.5e-19 1 No_clan D 204 268 EI  S-Bb L-Bb 
rve Domain Q76353_55-162 6.1e-10 1 CL0219 D 56 160   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5u1c.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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G (dna): 
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H (dna): 
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I (dna): 
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J (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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