General information
PDB ID 5U1J
Title STRUCTURE OF PNOB8 PARA BOUND TO NONSPECIFIC DNA
PDB header DNA BINDING PROTEIN/DNA
Date 2016-11-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.95
Kind dna
Organism SULFOLOBUS SP. NOB8H2, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5u1j.pdb BACD UW 0
Biounits:
5u1j.pdb1.pdb BC 1
5u1j.pdb2.pdb AD 1
5u1j.pdb3.pdb UW 1
5u1j.pdb4.pdb BACD UW 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
AAA_31 Domain O93708_3-181 3e-26 1 CL0023 A 3 181 W  L-Bb 
AAA_31 Domain O93708_3-181 3e-26 1 CL0023 A 3 181 W   
AAA_31 Domain O93708_3-181 3e-26 1 CL0023 A 3 181  L-Bb 
AAA_31 Domain O93708_3-181 3e-26 1 CL0023 A 3 181   
AAA_31 Domain O93708_3-181 2.4e-26 1 CL0023 B 3 181 W  L-Bb 
AAA_31 Domain O93708_3-181 2.4e-26 1 CL0023 B 3 181 W   
AAA_31 Domain O93708_3-181 2.4e-26 1 CL0023 B 3 181  L-Bb 
AAA_31 Domain O93708_3-181 2.4e-26 1 CL0023 B 3 181   
AAA_31 Domain O93708_3-181 1.4e-25 1 CL0023 C 3 181   
AAA_31 Domain O93708_3-181 1.4e-25 1 CL0023 C 3 181   
AAA_31 Domain O93708_3-181 1.4e-25 1 CL0023 C 3 181   
AAA_31 Domain O93708_3-181 1.4e-25 1 CL0023 C 3 181   
AAA_31 Domain O93708_3-181 3.5e-25 1 CL0023 D 3 181   
AAA_31 Domain O93708_3-181 3.5e-25 1 CL0023 D 3 181   
AAA_31 Domain O93708_3-181 3.5e-25 1 CL0023 D 3 181   
AAA_31 Domain O93708_3-181 3.5e-25 1 CL0023 D 3 181   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5u1j.pdb1.pdb:   [ download sequences in FASTA format ]
B (protein): 
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C (protein): 
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5u1j.pdb2.pdb:   [ download sequences in FASTA format ]
A (protein): 
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D (protein): 
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5u1j.pdb3.pdb:   [ download sequences in FASTA format ]
U (dna): 
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W (dna): 
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5u1j.pdb4.pdb:   [ download sequences in FASTA format ]
U (dna): 
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W (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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