General information
PDB ID 5UHF
Title CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TRANSCRIPTION INITIATION COMPLEX IN COMPLEX WITH D-IX336
PDB header TRANSCRIPTION/DNA/RNA
Date 2017-01-11
Experimental method X-RAY DIFFRACTION
Resolution (A) 4.35
Kind dna
Organism
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5uhf.pdb ABCDEF HG 0
Biounits:
5uhf.pdb1.pdb ABCDEF HG 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RNA_pol_A_bac Domain P9WGZ1_52-152 5.7e-26 1 No_clan A 52 152   
RNA_pol_L Domain P9WGZ1_24-219 3.1e-21 1 CL0509 A 24 219   
RNA_pol_A_bac Domain P9WGZ1_52-152 5.7e-26 1 No_clan B 52 152   
RNA_pol_L Domain P9WGZ1_24-219 3.2e-21 1 CL0509 B 24 219   
RNA_pol_Rpb2_6 Domain P9WGY9_643-1062 3.2e-156 1 CL0410 C 643 1062   
RNA_pol_Rpb2_3 Domain P9WGY9_438-506 4.9e-29 1 No_clan C 438 506 GH   
RNA_pol_Rpb2_45 Domain P9WGY9_516-582 1e-27 1 No_clan C 516 582   
RNA_pol_Rpb2_2 Domain P9WGY9_181-379 1.3e-26 1 No_clan C 181 379 H   
RNA_pol_Rpb2_7 Domain P9WGY9_1064-1140 6e-26 1 No_clan C 1064 1140 G   
RNA_pol_Rpb1_1 Domain P9WGY7_4-417 2.2e-82 1 No_clan D 4 417 GH   
RNA_pol_Rpb1_5 Domain 4.1e-36 1 No_clan D 843 1027 G
RNA_pol_Rpb1_2 Domain P9WGY7_419-561 1.5e-35 1 No_clan D 419 561 G   
RNA_pol_Rpb1_3 Domain P9WGY7_564-736 4e-27 1 No_clan D 564 736   
RNA_pol_Rpb1_5 Domain 8e-15 1 No_clan D 1062 1218
RNA_pol_Rpb1_4 Domain P9WGY7_748-843 5.9e-08 1 No_clan D 748 843   
Sigma70_r2 Domain P9WGI1_295-365 9.3e-23 1 CL0123 F 295 365 H   
Sigma70_r4 Domain P9WGI1_463-516 5.4e-19 1 CL0123 F 463 516   
RNA_pol_Rpb2_1 Family P9WGY9_52-425 2.2e-21 1 No_clan C 52 425 H   
RNA_pol_Rpb6 Family P9WGY5_42-105 7e-15 1 No_clan E 42 105   
Sigma70_r3 Family P9WGI1_374-451 8.6e-29 1 CL0123 F 374 451   
Sigma70_r1_2 Family P9WGI1_226-259 2.5e-16 1 No_clan F 226 259 H   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5uhf.pdb1.pdb:   [ download sequences in FASTA format ]
G (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text