General information
PDB ID 5V07
Title CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (D173A) IN COMPLEX WITH 5' RECESSED-END DNA (RV)
PDB header HYDROLASE/DNA
Date 2017-02-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.15
Kind dna
Organism HOMO SAPIENS, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5v07.pdb Z AB 0
Biounits:
5v07.pdb1.pdb Z AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
XPG_N Family Q9UQ84_2-99 3.9e-21 1 CL0280 Z 2 99 AB  H-Bb H-Mj H-Mn 
XPG_I Family Q9UQ84_141-225 4.4e-21 1 CL0464 Z 141 225 B  L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
Z=1-352 C nuclear body
Z=1-352 C nucleoplasm
Z=1-352 C nucleus
Z=1-352 C plasma membrane
Z=1-352 F 5'-3' exodeoxyribonuclease activity
Z=1-352 F 5'-3' exonuclease activity
Z=1-352 F 5'-flap endonuclease activity
Z=1-352 F chromatin binding
Z=1-352 F DNA binding
Z=1-352 F double-stranded DNA 5'-3' exodeoxyribonuclease activity
Z=1-352 F exonuclease activity
Z=1-352 F flap endonuclease activity
Z=1-352 F metal ion binding
Z=1-352 F RNA-DNA hybrid ribonuclease activity
Z=1-352 F single-stranded DNA 5'-3' exodeoxyribonuclease activity
Z=1-352 P DNA recombination
Z=1-352 P DNA repair
Z=1-352 P DNA replication
Z=1-352 P humoral immune response mediated by circulating immunoglobulin
Z=1-352 P isotype switching
Z=1-352 P meiotic cell cycle
Z=1-352 P mismatch repair
Z=1-352 P regulation of signal transduction by p53 class mediator
Z=1-352 P somatic hypermutation of immunoglobulin genes
Z=1-352 P t-circle formation
Sequences
Download file with secondary structure created by Stride  
5v07.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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Z (protein): 
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