General information
PDB ID 5V7Q
Title CRYO-EM STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM MYCOBACTERIUM TUBERCULOSIS BOUND WITH A POTENT LINEZOLID ANALOG
PDB header RIBOSOME
Date 2017-03-20
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.7
Kind rna
Organism MYCOBACTERIUM TUBERCULOSIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5v7q.pdb 012346CDEFGHJKLMNOPQRSTUVWXYZ AB 0
Biounits:
5v7q.pdb1.pdb 012346CDEFGHJKLMNOPQRSTUVWXYZ AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L36 Domain P9WH89_1-37 8.3e-17 1 No_clan 4 1 37 A   
Ribosomal_L2_C Domain P9WHA5_126-251 1.1e-54 1 CL0107 C 126 251 A   
Ribosomal_L2 Domain P9WHA5_42-119 7.6e-34 1 CL0021 C 42 119 A   
Ribosomal_L5_C Domain P9WH83_91-181 1.1e-35 1 No_clan F 91 181 AB   
Ribosomal_L5 Domain P9WH83_31-87 2.3e-26 1 CL0652 F 31 87 AB   
Ribosomal_L6 Domain P9WH81_91-166 6.9e-22 1 No_clan G 91 166 A   
Ribosomal_L6 Domain P9WH81_11-83 2.1e-16 1 No_clan G 11 83 A   
Ribosomal_L9_N Domain P9WH79_1-47 2.8e-21 1 No_clan H 1 47 A   
Ribosomal_L14 Domain P9WHD9_2-122 7.3e-54 1 No_clan K 2 122 A   
Ribosomal_L22 Domain P9WHC1_15-118 1e-35 1 No_clan S 15 118 A   
Ribosomal_L25p Domain P9WHB5_9-95 4.2e-23 1 No_clan V 9 95 B   
Ribosomal_TL5_C Domain P9WHB5_103-182 4.9e-16 1 No_clan V 103 182   
Ribosomal_L30 Domain P9WHA3_4-54 6.5e-19 1 No_clan Z 4 54 A   
Ribosomal_L32p Family P9WH99_2-50 3.5e-11 1 CL0167 0 2 49 A   
Ribosomal_L33 Family P9WH95_9-54 2.4e-23 1 CL0167 1 9 54 A   
Ribosomal_L34 Family P9WH93_4-45 5.2e-17 1 No_clan 2 4 45 A   
Ribosomal_L35p Family P9WH91_2-62 6.4e-24 1 No_clan 3 2 62 A   
Ribosomal_L31 Family P9WHA1_1-45 8.4e-20 1 No_clan 6 1 45 B   
Ribosomal_L3 Family P9WH87_85-214 1.5e-18 1 CL0575 D 85 190 A   
Ribosomal_L4 Family P9WH85_24-212 7.1e-65 1 No_clan E 24 212 A   
Ribosomal_L13 Family P9WHE1_14-138 1.7e-53 1 No_clan J 14 138 A   
Ribosomal_L27A Family P9WHD7_28-145 2.4e-31 1 CL0588 L 28 145 A   
Ribosomal_L16 Family P9WHD5_4-132 1.2e-46 1 No_clan M 4 132 A   
Ribosomal_L17 Family P9WHD3_20-116 2.9e-36 1 No_clan N 20 116 A   
Ribosomal_L18p Family P9WHD1_7-122 1.7e-47 1 CL0267 O 7 122 A   
Ribosomal_L19 Family P9WHC9_2-112 2.4e-50 1 CL0107 P 2 112 A   
Ribosomal_L20 Family P9WHC5_3-109 9.4e-42 1 No_clan Q 3 109 A   
Ribosomal_L21p Family P9WHC3_4-101 5.5e-32 1 No_clan R 5 102 A   
Ribosomal_L23 Family P9WHB9_9-95 5e-31 1 No_clan T 9 95 A   
ribosomal_L24 Family P9WHB7_38-104 6.4e-17 1 No_clan U 38 104 A   
KOW Family P9WHB7_5-36 2.5e-11 1 CL0107 U 5 36   
Ribosomal_L27 Family P9WHB3_12-80 8.9e-31 1 No_clan W 12 80 A   
Ribosomal_L28 Family I6YEU6_3-62 4.4e-23 1 No_clan X 3 62 A   
Ribosomal_L29 Family P9WHA7_8-64 1.2e-24 1 CL0346 Y 8 64 A   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5v7q.pdb1.pdb:   [ download sequences in FASTA format ]
0 (protein): 
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1 (protein): 
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2 (protein): 
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3 (protein): 
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4 (protein): 
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6 (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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J (protein): 
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K (protein): 
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L (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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U (protein): 
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V (protein): 
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W (protein): 
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X (protein): 
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Y (protein): 
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Z (protein): 
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A (rna): 
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B (rna): 
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