General information
PDB ID 5W9S
Title ZINC FINGER OF HUMAN CXXC5 IN COMPLEX WITH CPG DNA
PDB header DNA BINDING PROTEIN/DNA
Date 2017-06-23
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.1
Kind dna
Organism SYNTHETIC CONSTRUCT, HOMO SAPIENS
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5w9s.pdb C AB 0
Biounits:
5w9s.pdb1.pdb C AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-CXXC Domain Q7LFL8_258-296 1.5e-08 1 No_clan C 258 296 AB  H-Bb H-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
C=254-306 C cytosol
C=254-306 C nucleoplasm
C=254-306 F methyl-CpG binding
C=254-306 F sequence-specific DNA binding
C=254-306 F transcription factor binding
C=254-306 F zinc ion binding
C=254-306 P negative regulation of transcription by RNA polymerase II
C=254-306 P positive regulation of I-kappaB kinase/NF-kappaB signaling
Sequences
Download file with secondary structure created by Stride  
5w9s.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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