General information
PDB ID 5X6E
Title CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX
PDB header DNA BINDING PROTEIN/DNA
Date 2017-02-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.99
Kind dna
Organism LISTERIA MONOCYTOGENES
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5x6e.pdb MNABEF OPCDGH 0
Biounits:
5x6e.pdb1.pdb MN OP 1
5x6e.pdb2.pdb AB CD 1
5x6e.pdb3.pdb EF GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HTH_Crp_2 Domain P22262_141-217 2e-06 1 CL0123 A 141 217 CD  H-Bb H-Mj L-Bb L-Mj 
cNMP_binding Domain P22262_19-109 0.00015 0 CL0029 A 19 109   
HTH_Crp_2 Domain P22262_141-217 2e-06 1 CL0123 B 141 217 CD  H-Bb H-Mj L-Bb L-Mj 
cNMP_binding Domain P22262_19-109 0.00015 0 CL0029 B 19 109   
HTH_Crp_2 Domain P22262_141-217 2e-06 1 CL0123 E 141 217 GH  H-Bb H-Mj L-Bb L-Mj 
cNMP_binding Domain P22262_19-109 0.00015 0 CL0029 E 19 109   
HTH_Crp_2 Domain P22262_141-217 2e-06 1 CL0123 F 141 217 GH  H-Bb H-Mj L-Bb L-Mj 
cNMP_binding Domain P22262_19-109 0.00015 0 CL0029 F 19 109   
HTH_Crp_2 Domain P22262_141-217 2e-06 1 CL0123 M 141 217 OP  H-Bb H-Mj L-Bb L-Mj 
cNMP_binding Domain P22262_19-109 0.00015 0 CL0029 M 19 109   
HTH_Crp_2 Domain P22262_141-217 2e-06 1 CL0123 N 141 217 OP  H-Bb H-Mj L-Bb L-Mj 
cNMP_binding Domain P22262_19-109 0.00015 0 CL0029 N 19 109   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/E/F/M/N=1-237 F DNA binding
A/B/E/F/M/N=1-237 F DNA-binding transcription factor activity
A/B/E/F/M/N=1-237 P pathogenesis
Sequences
Download file with secondary structure created by Stride  
5x6e.pdb1.pdb:   [ download sequences in FASTA format ]
O (dna): 
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P (dna): 
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M (protein): 
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N (protein): 
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5x6e.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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5x6e.pdb3.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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E (protein): 
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F (protein): 
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