General information
PDB ID 5XM9
Title CRYSTAL STRUCTURE OF ASFVPOLX IN COMPLEX WITH DNA ENZYME.
PDB header TRANSFERASE/DNA
Date 2017-05-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.05
Kind dna
Organism SYNTHETIC CONSTRUCT
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5xm9.pdb ABCD EFGH 0
Biounits:
5xm9.pdb1.pdb AB EF 1
5xm9.pdb2.pdb CD GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_thumb Family P42494_112-174 4.3e-12 1 No_clan A 112 174 EF  H-Bb H-Mj H-Mn 
DNA_pol_B_thumb Family P42494_112-174 4.3e-12 1 No_clan B 112 174 EF  H-Bb H-Mj H-Mn 
DNA_pol_B_thumb Family P42494_112-174 4.3e-12 1 No_clan C 112 174 GH  H-Bb H-Mj H-Mn 
DNA_pol_B_thumb Family P42494_112-174 4.3e-12 1 No_clan D 112 174 GH  H-Bb H-Mj H-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-174 F DNA binding
A/B/C/D=1-174 F DNA-directed DNA polymerase activity
A/B/C/D=1-174 F metal ion binding
A/B/C/D=1-174 P DNA repair
Sequences
Download file with secondary structure created by Stride  
5xm9.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
Click "SHOW" for view sequence
F (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
5xm9.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
Click "SHOW" for view sequence
H (dna): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text