General information
PDB ID 5Y36
Title CRYO-EM STRUCTURE OF SPCAS9-SGRNA-DNA TERNARY COMPLEX
PDB header HYDROLASE/RNA/DNA
Date 2017-07-27
Experimental method ELECTRON MICROSCOPY
Resolution (A) 5.2
Kind hybrid
Organism STREPTOCOCCUS PYOGENES SEROTYPE M1, MUS MUSCULUS
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5y36.pdb A CD B 0
Biounits:
5y36.pdb1.pdb A CD B 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Cas9_PI Domain Q99ZW2_1102-1358 3.9e-45 1 No_clan A 1102 1358 BCD  L-Bb L-Mj 
HNH_4 Domain Q99ZW2_821-872 3.8e-13 1 CL0263 A 821 872 BC   
Cas9_REC Family Q99ZW2_181-712 2.4e-176 1 CL0693 A 181 712 BC   
Cas9-BH Family Q99ZW2_62-94 9.8e-10 1 No_clan A 62 94 BC   
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=1-1368 F 3'-5' exonuclease activity
A=1-1368 F DNA binding
A=1-1368 F endodeoxyribonuclease activity
A=1-1368 F metal ion binding
A=1-1368 F RNA binding
A=1-1368 P defense response to virus
A=1-1368 P maintenance of CRISPR repeat elements
Sequences
Download file with secondary structure created by Stride  
5y36.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (rna): 
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