General information
PDB ID 5YEL
Title CRYSTAL STRUCTURE OF CTCF ZFS6-11-GB7CSE
PDB header DNA BINDING PROTEIN/DNA
Date 2017-09-18
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.96
Kind dna
Organism SYNTHETIC CONSTRUCT, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5yel.pdb AB DCFE 0
Biounits:
5yel.pdb1.pdb B DC 1
5yel.pdb2.pdb A FE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-H2C2_2 Domain 0.0000077 0 CL0361 A 481 506 EF
zf-H2C2_2 Domain 0.00011 0 CL0361 A 507 534 EF
LIM Domain 0.00021 0 CL0167 A 525 576 EF
zf-C2H2 Domain P49711_555-575 0.00066 1 CL0361 A 555 576 EF  H-Bb L-Bb L-Mj 
zf-H2C2_2 Domain 0.0000079 0 CL0361 B 481 506 CD
zf-H2C2_2 Domain 0.00011 0 CL0361 B 507 534 CD
zf-C2H2 Domain P49711_555-575 0.00067 1 CL0361 B 555 576 CD  H-Bb L-Bb L-Mj 
LIM Domain 0.00097 0 CL0167 B 525 577 CD
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5yel.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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B (protein): 
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5yel.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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A (protein): 
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