General information
PDB ID 5YI3
Title STRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30S MUTANT IN COMPLEX WITH DNA
PDB header METAL BINDING PROTEIN/DNA
Date 2017-10-01
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind dna
Organism LACTOCOCCUS LACTIS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5yi3.pdb ABEFIJMN CGKOPLHD 0
Biounits:
5yi3.pdb1.pdb AB CD 1
5yi3.pdb2.pdb EF GH 1
5yi3.pdb3.pdb IJ KL 1
5yi3.pdb4.pdb MN OP 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
MarR Domain Q9CDU5_35-92 2.4e-13 1 CL0123 A 36 93 CD  H-Bb H-Mj L-Bb L-Mj 
MarR Domain Q9CDU5_35-92 2.3e-13 1 CL0123 B 36 93 CD  H-Bb H-Mj L-Bb L-Mj 
MarR Domain Q9CDU5_35-92 2.3e-13 1 CL0123 E 36 93 GH  H-Bb H-Mj L-Bb L-Mj 
MarR Domain Q9CDU5_35-92 2.3e-13 1 CL0123 F 36 93 GH  H-Bb H-Mj L-Bb L-Mj 
MarR Domain Q9CDU5_35-92 2.3e-13 1 CL0123 I 36 93 KL  H-Bb H-Mj L-Bb L-Mj 
MarR Domain Q9CDU5_35-92 2.3e-13 1 CL0123 J 36 93 KL  H-Bb H-Mj L-Bb L-Mj 
MarR Domain Q9CDU5_35-92 2.3e-13 1 CL0123 M 36 93 OP  H-Bb H-Mj L-Bb L-Mj 
MarR Domain Q9CDU5_35-92 2.3e-13 1 CL0123 N 36 93 OP  H-Bb H-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
5yi3.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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5yi3.pdb2.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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E (protein): 
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F (protein): 
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5yi3.pdb3.pdb:   [ download sequences in FASTA format ]
K (dna): 
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L (dna): 
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I (protein): 
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J (protein): 
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5yi3.pdb4.pdb:   [ download sequences in FASTA format ]
O (dna): 
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P (dna): 
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M (protein): 
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N (protein): 
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