General information
PDB ID 5YTH
Title STRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE M-FC PAIR WITH DG
PDB header TRANSFERASE/DNA
Date 2017-11-17
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.53
Kind dna
Organism THERMUS AQUATICUS, SYNTHETIC CONSTRUCT
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5yth.pdb A BC 0
Biounits:
5yth.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Taq-exonuc Domain P19821_294-420 4e-40 1 CL0219 A 294 420   
DNA_pol_A Family P19821_453-829 9.2e-151 1 No_clan A 453 829 BC  H-Bb H-Mn S-Bb L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=294-832 F DNA binding
A=294-832 F DNA-directed DNA polymerase activity
A=294-832 F nucleoside binding
A=294-832 P DNA repair
A=294-832 P DNA-dependent DNA replication
Sequences
Download file with secondary structure created by Stride  
5yth.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text