General information
PDB ID 5ZFY
Title CRYSTAL STRUCTURE OF HUMAN DUX4 HOMEODOMAINS BOUND TO A12C DNA MUTANT
PDB header TRANSCRIPTION/DNA
Date 2018-03-07
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism HOMO SAPIENS, SYNTHETIC CONSTRUCT
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CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5zfy.pdb A DE 0
Biounits:
5zfy.pdb1.pdb A DE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Homeodomain Domain Q9UBX2_98-149 1.3e-18 1 CL0123 A 95 149 DE  H-Bb H-Mj L-Bb L-Mn 
Homeodomain Domain Q9UBX2_20-76 3.1e-17 1 CL0123 A 20 76 DE  H-Bb H-Mj L-Bb L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=1-149 C cytosol
A=1-149 C Golgi apparatus
A=1-149 C nuclear membrane
A=1-149 C nucleolus
A=1-149 C nucleoplasm
A=1-149 C nucleus
A=1-149 F DNA-binding transcription activator activity, RNA polymerase II-specific
A=1-149 F DNA-binding transcription factor activity
A=1-149 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A=1-149 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A=1-149 F sequence-specific double-stranded DNA binding
A=1-149 F transcription regulatory region sequence-specific DNA binding
A=1-149 P apoptotic process
A=1-149 P multicellular organism development
A=1-149 P negative regulation of cell population proliferation
A=1-149 P negative regulation of G0 to G1 transition
A=1-149 P positive regulation of transcription by RNA polymerase II
A=1-149 P regulation of transcription by RNA polymerase II
Sequences
Download file with secondary structure created by Stride  
5zfy.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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A (protein): 
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