General information
PDB ID 5ZR1
Title SACCHAROMYCES CEREVISIAE ORIGIN RECOGNITION COMPLEX BOUND TO A 72-BP ORIGIN DNA CONTAINING ACS AND B1 ELEMENT
PDB header DNA BINDING PROTEIN/DNA
Date 2018-04-21
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3
Kind dna
Organism SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb5zr1.pdb ABCDEF GH 0
Biounits:
5zr1.pdb1.pdb ABCDEF GH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
AAA_lid_10 Domain P54784_637-730 1.3e-36 1 CL0671 A 637 775   
AAA Domain P54784_475-621 6.7e-20 1 CL0023 A 475 621 G  H-Bb L-Bb 
ORC_WH_C Domain P54790_484-613 8.4e-18 1 CL0123 C 484 613   
AAA_22 Domain P54791_47-185 9.4e-05 0 CL0023 D 91 257   
AAA_22 Domain P50874_28-177 1.9e-06 1 CL0023 E 28 177 G  H-Bb 
ORC2 Family P32833_259-608 2.6e-112 1 No_clan B 259 608 GH  H-Bb L-Bb L-Mj 
ORC4_C Family P54791_286-517 8.3e-37 1 CL0671 D 286 517 GH  H-Bb H-Mj L-Bb L-Mj 
ORC5_C Family P50874_187-474 2.4e-57 1 No_clan E 187 474 GH  L-Bb L-Mj L-Mn 
ORC6 Family P38826_271-416 3.2e-49 1 No_clan F 271 416 G  L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=1-914 C DNA replication preinitiation complex
A=1-914 C nuclear chromosome, telomeric region
A=1-914 C nuclear origin of replication recognition complex
A=1-914 C nuclear pre-replicative complex
A=1-914 C nucleus
A=1-914 F ATP binding
A=1-914 F ATPase activity
A=1-914 F chromatin binding
A=1-914 F DNA replication origin binding
A=1-914 F metal ion binding
A=1-914 F nucleosome binding
A=1-914 P DNA replication initiation
A=1-914 P maintenance of rDNA
A=1-914 P mitotic cell cycle
A=1-914 P mitotic DNA replication checkpoint
A=1-914 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
A=1-914 P silent mating-type cassette heterochromatin assembly
B=1-620 C chromosome, telomeric region
B=1-620 C DNA replication preinitiation complex
B=1-620 C nuclear origin of replication recognition complex
B=1-620 C nuclear pre-replicative complex
B=1-620 F chromatin binding
B=1-620 F DNA replication origin binding
B=1-620 P chromatin silencing at telomere
B=1-620 P DNA replication initiation
B=1-620 P histone H3-K4 methylation
B=1-620 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
B=1-620 P silent mating-type cassette heterochromatin assembly
C=1-616 C DNA replication preinitiation complex
C=1-616 C nuclear origin of replication recognition complex
C=1-616 C nuclear pre-replicative complex
C=1-616 F chromatin binding
C=1-616 F DNA replication origin binding
C=1-616 P DNA replication initiation
C=1-616 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
C=1-616 P silent mating-type cassette heterochromatin assembly
D=1-529 C DNA replication preinitiation complex
D=1-529 C nuclear origin of replication recognition complex
D=1-529 C nuclear pre-replicative complex
D=1-529 F DNA replication origin binding
D=1-529 P DNA replication initiation
D=1-529 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
D=1-529 P silent mating-type cassette heterochromatin assembly
E=1-479 C DNA replication preinitiation complex
E=1-479 C nuclear origin of replication recognition complex
E=1-479 C nuclear pre-replicative complex
E=1-479 F ATP binding
E=1-479 F DNA replication origin binding
E=1-479 P DNA replication initiation
E=1-479 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
E=1-479 P regulation of chromatin silencing at telomere
E=1-479 P silent mating-type cassette heterochromatin assembly
F=1-435 C DNA replication preinitiation complex
F=1-435 C nuclear origin of replication recognition complex
F=1-435 C nuclear pre-replicative complex
F=1-435 F DNA replication origin binding
F=1-435 P DNA replication initiation
F=1-435 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
F=1-435 P silent mating-type cassette heterochromatin assembly
Sequences
Download file with secondary structure created by Stride  
5zr1.pdb1.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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