General information
PDB ID 6ASB
Title CXXC AND PHD-TYPE ZINC FINGER REGIONS OF FBXL19 IN COMPLEX WITH DNA
PDB header DNA BINDING PROTEIN/DNA
Date 2017-08-24
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.85
Kind dna
Organism SYNTHETIC CONSTRUCT, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6asb.pdb CFIL ABDEGHJK 0
Biounits:
6asb.pdb1.pdb C AB 1
6asb.pdb2.pdb F DE 1
6asb.pdb3.pdb I GH 1
6asb.pdb4.pdb L JK 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PHD_4 Domain Q6PCT2_82-149 1.5e-26 1 CL0390 C 82 149 B  L-Bb 
zf-CXXC Domain Q6PCT2_33-77 3.9e-14 1 No_clan C 35 77 AB  H-Bb L-Bb L-Mj L-Mn 
zf-CXXC Domain Q6PCT2_33-77 1.8e-14 1 No_clan F 35 77 DE  H-Bb L-Bb L-Mj L-Mn 
PHD_4 Domain Q6PCT2_82-149 1.6e-26 1 CL0390 I 82 149 H  L-Bb 
zf-CXXC Domain Q6PCT2_33-77 2.6e-14 1 No_clan I 33 77 GH  H-Bb L-Bb L-Mj L-Mn 
PHD_4 Domain Q6PCT2_82-149 5.7e-20 1 CL0390 L 82 149 K  L-Bb 
zf-CXXC Domain Q6PCT2_33-77 2.1e-14 1 No_clan L 33 77 JK  L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
C/F/I/L=31-153 C cytosol
C/F/I/L=31-153 C SCF ubiquitin ligase complex
C/F/I/L=31-153 F unmethylated CpG binding
C/F/I/L=31-153 F zinc ion binding
C/F/I/L=31-153 P post-translational protein modification
C/F/I/L=31-153 P proteasome-mediated ubiquitin-dependent protein catabolic process
C/F/I/L=31-153 P protein polyubiquitination
Sequences
Download file with secondary structure created by Stride  
6asb.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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6asb.pdb2.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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F (protein): 
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6asb.pdb3.pdb:   [ download sequences in FASTA format ]
G (dna): 
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H (dna): 
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I (protein): 
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6asb.pdb4.pdb:   [ download sequences in FASTA format ]
J (dna): 
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K (dna): 
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L (protein): 
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