General information
PDB ID 6C66
Title CRISPR RNA-GUIDED SURVEILLANCE COMPLEX, PRE-NICKING
PDB header DNA BINDING PROTEIN/DNA/RNA
Date 2018-01-17
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.66
Kind hybrid
Organism THERMOBIFIDA FUSCA (STRAIN YX)
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6c66.pdb GABCDEFHIKMO LN J 0
Biounits:
6c66.pdb1.pdb GABCDEFHIKMO LN J 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HD_6 Domain Q47PJ0_21-224 4.8e-33 1 CL0237 G 21 224 N   
Helicase_C Domain Q47PJ0_567-694 2.1e-05 1 CL0023 G 568 694   
Cas3_C Domain Q47PJ0_828-942 2.7e-05 0 No_clan G 828 942 N   
AAA_19 Domain Q47PJ0_295-474 2.8e-05 0 CL0023 G 295 474 N   
CRISPR_assoc Domain Q47PJ5_2-224 4.1e-39 1 CL0362 O 2 224 J   
CRISPR_Cse1 Family Q47PJ1_21-492 5.1e-62 1 No_clan A 21 492 JLN  S-Bb L-Bb L-Mj L-Mn 
Cas_CT1975 Family Q47PJ3_4-365 7.4e-95 1 CL0362 B 4 365 JL   
Cas_Cas7 Family 0.00011 0 No_clan B 4 299 JL
Cas_CT1975 Family Q47PJ3_4-365 4.8e-106 1 CL0362 C 4 365 JL   
Cas_Cas7 Family 0.00077 0 No_clan C 4 291 JL
Cas_CT1975 Family Q47PJ3_4-365 4.8e-106 1 CL0362 D 4 365 JL   
Cas_Cas7 Family 0.00077 0 No_clan D 4 291 JL
Cas_CT1975 Family Q47PJ3_4-365 4.7e-106 1 CL0362 E 4 365 JL   
Cas_Cas7 Family 0.00076 0 No_clan E 4 291 JL
Cas_CT1975 Family Q47PJ3_4-365 4.7e-106 1 CL0362 F 4 365 JLN  L-Bb 
Cas_Cas7 Family 0.00076 0 No_clan F 4 291 JLN
Cas_CT1975 Family 4.5e-55 1 CL0362 H 4 228 JL
Cas_CT1975 Family 5.9e-19 1 CL0362 H 197 365
CRISPR_Cse2 Family Q47PJ2_27-218 6.9e-26 1 No_clan I 27 218 L   
CRISPR_Cse2 Family Q47PJ2_27-218 5.4e-24 1 No_clan K 27 218 LN  L-Bb 
Cas_Cas5d Family Q47PJ4_3-220 1.3e-43 1 CL0362 M 3 220 JLN  L-Bb 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6c66.pdb1.pdb:   [ download sequences in FASTA format ]
L (dna): 
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N (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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I (protein): 
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K (protein): 
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M (protein): 
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O (protein): 
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J (rna): 
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