General information
PDB ID 6FBU
Title CRYSTAL STRUCTURE OF THE DNA REPAIR ENZYME ENDONUCLEASE-VIII (NEI) FROM E. COLI (E2Q) IN COMPLEX WITH AP-SITE CONTAINING DNA SUBSTRATE
PDB header HYDROLASE
Date 2017-12-19
Experimental method X-RAY DIFFRACTION
Resolution (A) 2
Kind dna
Organism ESCHERICHIA COLI, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6fbu.pdb A BC 0
Biounits:
6fbu.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
H2TH Domain P50465_126-215 1.2e-10 1 CL0303 A 125 225 C  H-Bb L-Bb 
Fapy_DNA_glyco Domain P50465_2-107 1.3e-08 1 No_clan A 1 106 BC  S-Bb L-Bb L-Mj L-Mn 
zf-FPG_IleRS Domain P50465_235-263 1.4e-05 1 CL0167 A 234 262 C  S-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A=2-263 F class I DNA-(apurinic or apyrimidinic site) endonuclease activity
A=2-263 F damaged DNA binding
A=2-263 F DNA N-glycosylase activity
A=2-263 F DNA-(apurinic or apyrimidinic site) endonuclease activity
A=2-263 F endonuclease activity
A=2-263 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
A=2-263 F zinc ion binding
A=2-263 P base-excision repair
A=2-263 P nucleotide-excision repair
Sequences
Download file with secondary structure created by Stride  
6fbu.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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