General information
PDB ID 6FML
Title CRYOEM STRUCTURE INO80CORE NUCLEOSOME COMPLEX
PDB header DNA BINDING PROTEIN
Date 2018-01-31
Experimental method ELECTRON MICROSCOPY
Resolution (A) 4.34
Kind dna
Organism SYNTHETIC CONSTRUCT, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6fml.pdb ABCDEFGHIJMNOPQRST KL 0
Biounits:
6fml.pdb1.pdb ABCDEFGHIJMNOPQRST KL 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
YL1_C Domain G0S590_169-197 3.5e-16 1 No_clan I 169 197   
Histone Domain Q71DI3_38-132 2.8e-45 1 CL0012 M 40 131 KL   
CENP-T_C Domain P62805_26-99 0.0000000089 1 CL0012 N 26 98 KL   
Histone Domain P0C0S9_13-91 9.7e-16 1 CL0012 O 16 90 KL   
Histone Domain P62807_33-102 1e-21 1 CL0012 P 31 101 KL   
Histone Domain Q71DI3_38-132 3.1e-46 1 CL0012 Q 38 131 KL   
CENP-T_C Domain P62805_26-99 0.0000000095 1 CL0012 R 25 98 KL   
Histone Domain P0C0S9_13-91 4.8e-16 1 CL0012 S 12 90 KL   
Histone Domain P62807_33-102 1e-21 1 CL0012 T 31 101 KL   
TIP49 Family G0RYI5_15-370 4.5e-188 1 CL0023 A 15 417   
TIP49 Family G0RYI5_15-370 7.6e-182 1 CL0023 B 15 417   
TIP49 Family G0RYI5_15-370 4.9e-188 1 CL0023 C 15 417   
TIP49 Family G0RYC2_20-364 1.3e-175 1 CL0023 D 20 411   
TIP49 Family G0RYC2_20-364 2.7e-175 1 CL0023 E 20 411   
TIP49 Family G0RYC2_20-364 1e-173 1 CL0023 F 20 411   
SNF2_N Family 4e-63 1 CL0023 G 975 1274 KL
Helicase_C Family 7e-20 1 CL0023 G 1553 1666 KL
PAPA-1 Family G0RY01_383-465 0.000061 1 No_clan H 397 465   
Actin Family G0S589_151-397 1.2e-34 1 CL0108 J 54 277 K   
Actin Family G0S589_712-859 1.3e-20 1 CL0108 J 621 762   
Histone_H2A_C Family P0C0S9_92-119 1.8e-18 1 No_clan O 91 119   
Histone_H2A_C Family P0C0S9_92-119 1.3e-17 1 No_clan S 91 118   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6fml.pdb1.pdb:   [ download sequences in FASTA format ]
K (dna): 
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L (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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I (protein): 
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J (protein): 
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M (protein): 
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N (protein): 
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O (protein): 
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P (protein): 
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Q (protein): 
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R (protein): 
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S (protein): 
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T (protein): 
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