General information
PDB ID 6FZS
Title CRYSTAL STRUCTURE OF SMAD5-MH1 BOUND TO THE GGCGC SITE.
PDB header TRANSCRIPTION
Date 2018-03-15
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.31
Kind dna
Organism HOMO SAPIENS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6fzs.pdb AB CD 0
Biounits:
6fzs.pdb1.pdb AB CD 2
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
MH1 Domain Q99717_31-132 2.6e-43 1 CL0263 A 31 132 CD  H-Bb S-Bb S-Mj L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=9-138 C cytoplasm
A/B=9-138 C cytosol
A/B=9-138 C nuclear chromatin
A/B=9-138 C nucleoplasm
A/B=9-138 C nucleus
A/B=9-138 C protein-containing complex
A/B=9-138 C SMAD protein complex
A/B=9-138 C transcription regulator complex
A/B=9-138 F DEAD/H-box RNA helicase binding
A/B=9-138 F DNA-binding transcription factor activity, RNA polymerase II-specific
A/B=9-138 F DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B=9-138 F metal ion binding
A/B=9-138 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=9-138 F sequence-specific double-stranded DNA binding
A/B=9-138 F ubiquitin protein ligase binding
A/B=9-138 P BMP signaling pathway
A/B=9-138 P bone development
A/B=9-138 P cardiac muscle contraction
A/B=9-138 P cartilage development
A/B=9-138 P cellular response to organic cyclic compound
A/B=9-138 P embryonic pattern specification
A/B=9-138 P erythrocyte differentiation
A/B=9-138 P germ cell development
A/B=9-138 P Mullerian duct regression
A/B=9-138 P osteoblast fate commitment
A/B=9-138 P positive regulation of osteoblast differentiation
A/B=9-138 P positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
A/B=9-138 P positive regulation of transcription, DNA-templated
A/B=9-138 P protein phosphorylation
A/B=9-138 P signal transduction
A/B=9-138 P SMAD protein signal transduction
A/B=9-138 P transforming growth factor beta receptor signaling pathway
A/B=9-138 P ureteric bud development
Sequences
Download file with secondary structure created by Stride  
6fzs.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text