General information
PDB ID 6GDR
Title DNA BINDING WITH A MINIMAL SCAFFOLD: STRUCTURE-FUNCTION ANALYSIS OF LIG E DNA LIGASES
PDB header LIGASE
Date 2018-04-24
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.33
Kind dna
Organism ALTEROMONAS MEDITERRANEA
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6gdr.pdb A BCD 0
Biounits:
6gdr.pdb1.pdb A BCD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_ligase_OB_2 Domain A0A1J0SCU0_245-310 1.3e-28 1 CL0021 A 225 290 BDC  H-Bb S-Bb L-Bb L-Mn 
DNA_ligase_A_M Domain A0A1J0SCU0_31-231 2.3e-08 1 CL0078 A 12 211 BC  H-Bb S-Bb L-Bb 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6gdr.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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D (dna): 
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A (protein): 
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