General information
PDB ID 6KNC
Title POLD-PCNA-DNA (FORM B)
PDB header REPLICATION/DNA
Date 2019-08-05
Experimental method ELECTRON MICROSCOPY
Resolution (A) 9.3
Kind dna
Organism THERMOCOCCUS KODAKARENSIS KOD1, SYNTHETIC CONSTRUCT
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6knc.pdb ABCDE FG 0
Biounits:
6knc.pdb1.pdb ABCDE FG 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
tRNA_anti-codon Domain 2e-05 0 CL0021 A 380 451
PCNA_N Domain Q5JF32_2-124 4.6e-17 1 CL0060 C 2 124 F  L-Bb 
PCNA_C Domain Q5JF32_124-246 4.8e-10 1 CL0060 C 124 246 F  L-Bb 
PCNA_N Domain Q5JF32_2-124 4.6e-17 1 CL0060 D 2 124   
PCNA_C Domain Q5JF32_124-246 4.8e-10 1 CL0060 D 124 246   
PCNA_N Domain Q5JF32_2-124 4.6e-17 1 CL0060 E 2 124   
PCNA_C Domain Q5JF32_124-246 4.8e-10 1 CL0060 E 124 246 G  L-Bb 
DNA_pol_E_B Family Q5JET1_468-681 1.8e-15 1 CL0163 A 468 681   
PolC_DP2 Family Q5JET0_12-963 0 1 No_clan B 12 963 G  L-Bb L-Mj 
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6knc.pdb1.pdb:   [ download sequences in FASTA format ]
F (dna): 
Click "SHOW" for view sequence
G (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text