General information
PDB ID 6O8E
Title CRYSTAL STRUCTURE OF UVRB BOUND TO DUPLEX DNA WITH ADP
PDB header DNA BINDING PROTEIN/DNA
Date 2019-03-10
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.61
Kind dna
Organism BACILLUS CALDOTENAX, SYNTHETIC CONSTRUCT
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6o8e.pdb AB CDEF 0
Biounits:
6o8e.pdb1.pdb A CD 1
6o8e.pdb2.pdb B EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
UvrB_inter Domain P56981_160-249 4.5e-36 1 CL0664 A 159 249 C   
Helicase_C Domain P56981_429-545 1.6e-20 1 CL0023 A 429 545 C  H-Bb L-Mn 
UvrB_inter Domain P56981_160-249 4.5e-36 1 CL0664 B 159 249 E   
Helicase_C Domain P56981_429-545 1.6e-20 1 CL0023 B 429 545 E  H-Bb L-Bb L-Mn 
UvrB Family P56981_551-593 3.2e-22 1 CL0023 A 551 593   
ResIII Family P56981_12-141 1.5e-09 1 CL0023 A 11 150 CD  S-Mj 
UvrB Family P56981_551-593 5.3e-22 1 CL0023 B 551 592   
ResIII Family P56981_12-141 1.5e-09 1 CL0023 B 11 150 EF  S-Bb S-Mj L-Bb 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/B=2-593 C cytoplasm
A/B=2-593 C excinuclease repair complex
A/B=2-593 F ATP binding
A/B=2-593 F ATPase activity
A/B=2-593 F DNA binding
A/B=2-593 F excinuclease ABC activity
A/B=2-593 P nucleotide-excision repair
A/B=2-593 P SOS response
Sequences
Download file with secondary structure created by Stride  
6o8e.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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6o8e.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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B (protein): 
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