General information
PDB ID 6U91
Title CRYSTAL STRUCTURE OF DNMT3B(Q772R)-DNMT3L IN COMPLEX WITH CPGPT DNA
PDB header TRANSFERASE/DNA
Date 2019-09-06
Experimental method X-RAY DIFFRACTION
Resolution (A) 3
Kind dna
Organism HOMO SAPIENS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6u91.pdb ABCD EF 0
Biounits:
6u91.pdb1.pdb ABCD EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_methylase Domain Q9UBC3_575-725 2e-12 1 CL0063 A 575 725 EF  L-Bb L-Mj L-Mn 
DNA_methylase Domain Q9UBC3_575-725 2e-12 1 CL0063 D 575 725 EF  L-Bb L-Mj L-Mn 
SCOP domains
No SCOP domains
GO terms
Protein chains: GO type: GO description:
A/D=563-853 C nucleoplasm
A/D=563-853 C nucleus
A/D=563-853 F chromatin binding
A/D=563-853 F DNA (cytosine-5-)-methyltransferase activity
A/D=563-853 F DNA binding
A/D=563-853 F DNA-methyltransferase activity
A/D=563-853 F histone deacetylase binding
A/D=563-853 F metal ion binding
A/D=563-853 F transcription corepressor activity
A/D=563-853 P cellular response to dexamethasone stimulus
A/D=563-853 P cellular response to hyperoxia
A/D=563-853 P DNA methylation
A/D=563-853 P negative regulation of gene expression, epigenetic
A/D=563-853 P negative regulation of histone H3-K9 methylation
A/D=563-853 P negative regulation of transcription by RNA polymerase II
A/D=563-853 P positive regulation of gene expression
A/D=563-853 P positive regulation of histone H3-K4 methylation
A/D=563-853 P positive regulation of neuron differentiation
A/D=563-853 P response to activity
A/D=563-853 P response to caffeine
A/D=563-853 P response to cocaine
A/D=563-853 P response to drug
A/D=563-853 P response to estradiol
A/D=563-853 P response to hypoxia
A/D=563-853 P response to ionizing radiation
A/D=563-853 P response to toxic substance
A/D=563-853 P response to vitamin A
B/C=178-386 C cytosol
B/C=178-386 C nucleus
B/C=178-386 F enzyme activator activity
B/C=178-386 F enzyme binding
B/C=178-386 F metal ion binding
B/C=178-386 P DNA methylation
B/C=178-386 P DNA methylation involved in gamete generation
B/C=178-386 P DNA methylation on cytosine
B/C=178-386 P male meiosis I
B/C=178-386 P negative regulation of DNA methylation
B/C=178-386 P negative regulation of transcription, DNA-templated
B/C=178-386 P positive regulation of DNA methylation
B/C=178-386 P regulation of gene expression by genetic imprinting
B/C=178-386 P spermatogenesis
B/C=178-386 P stem cell differentiation
Sequences
Download file with secondary structure created by Stride  
6u91.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
Click "SHOW" for view sequence
F (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text