General information
PDB ID 6XJD
Title TWO MOUSE CGAS CATALYTIC DOMAIN BINDING TO HUMAN ASSEMBLED NUCLEOSOME
PDB header IMMUNE SYSTEM/DNA
Date 2020-06-23
Experimental method ELECTRON MICROSCOPY
Resolution (A) 6.8
Kind dna
Organism HOMO SAPIENS, MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6xjd.pdb ABCDEFGHKL IJ 0
Biounits:
6xjd.pdb1.pdb ABCDEFGHKL IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain Q71DI3_40-132 1.3e-45 1 CL0012 A 37 131 IJ  H-Bb H-Mj L-Bb L-Mn 
CENP-T_C Domain P62805_26-99 4.6e-08 1 CL0012 B 26 98 IJ  H-Bb H-Mj L-Bb 
Histone Domain P0C0S8_10-91 4e-16 1 CL0012 C 10 90 IJ  H-Bb S-Bb S-Mn L-Bb L-Mn 
Histone Domain P62807_33-102 4.6e-22 1 CL0012 D 30 101 IJ  H-Bb S-Bb L-Bb L-Mn 
Histone Domain Q71DI3_40-132 1.3e-45 1 CL0012 E 37 131 IJ  H-Bb H-Mj L-Bb L-Mn 
CENP-T_C Domain P62805_26-99 4.6e-08 1 CL0012 F 25 98 IJ  H-Bb L-Bb 
Histone Domain P0C0S8_10-91 3.8e-16 1 CL0012 G 10 90 IJ  H-Bb S-Bb S-Mn L-Bb L-Mn 
Histone Domain P62807_33-102 1.1e-21 1 CL0012 H 31 101 IJ  H-Bb L-Bb 
Histone_H2A_C Family P0C0S8_92-117 2.9e-16 1 No_clan C 91 117   
Histone_H2A_C Family P0C0S8_92-117 2.5e-15 1 No_clan G 91 116   
Mab-21 Family Q8C6L5_200-495 3e-79 1 No_clan K 200 495   
Mab-21 Family Q8C6L5_200-495 3e-79 1 No_clan L 200 495   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6xjd.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
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J (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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K (protein): 
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L (protein): 
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