General information
PDB ID 6Z2Y
Title CRYOEM STRUCTURE OF SIMIAN T-CELL LYMPHOTROPIC VIRUS INTASOME IN COMPLEX WITH PP2A REGULATORY SUBUNIT B56 GAMMA
PDB header VIRAL PROTEIN
Date 2020-05-18
Experimental method ELECTRON MICROSCOPY
Resolution (A) 3.34
Kind dna
Organism SIMIAN T-LYMPHOTROPIC VIRUS 1, HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb6z2y.pdb ABCDEF KLMN 0
Biounits:
6z2y.pdb1.pdb ABCDEF KLMN 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
rve Domain Q4QY51_656-747 1.5e-19 1 CL0219 A 57 158   
IN_DBD_C Domain Q4QY51_831-875 2.2e-17 1 CL0010 A 232 276   
Integrase_Zn Domain Q4QY51_603-638 4.8e-09 1 No_clan A 4 52   
rve Domain Q4QY51_656-747 2e-21 1 CL0219 B 57 151 KL  L-Bb 
IN_DBD_C Domain Q4QY51_831-875 2.4e-17 1 CL0010 B 232 276 KM  S-Bb 
Integrase_Zn Domain Q4QY51_603-638 3.3e-09 1 No_clan B 4 40 MN  H-Bb L-Bb 
rve Domain Q4QY51_656-747 1.5e-19 1 CL0219 D 57 158   
IN_DBD_C Domain Q4QY51_831-875 2.2e-17 1 CL0010 D 232 276   
Integrase_Zn Domain Q4QY51_603-638 4.8e-09 1 No_clan D 4 52   
rve Domain Q4QY51_656-747 2e-21 1 CL0219 E 57 151 MN  L-Bb 
IN_DBD_C Domain Q4QY51_831-875 2.4e-17 1 CL0010 E 232 276 KM  S-Bb 
Integrase_Zn Domain Q4QY51_603-638 3.3e-09 1 No_clan E 4 40 KL  H-Bb L-Bb 
B56 Repeat Q13362_27-333 2.3e-136 1 CL0020 C 27 333   
B56 Repeat Q13362_27-333 2.3e-136 1 CL0020 F 27 333   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
6z2y.pdb1.pdb:   [ download sequences in FASTA format ]
K (dna): 
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L (dna): 
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M (dna): 
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N (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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