General information
PDB ID 7K5Y
Title CRYO-EM STRUCTURE OF A CHROMATOSOME CONTAINING HUMAN LINKER HISTONE H1.4
PDB header NUCLEAR PROTEIN/DNA
Date 2020-09-17
Experimental method ELECTRON MICROSCOPY
Resolution (A) 2.76
Kind dna
Organism HOMO SAPIENS, MUS MUSCULUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb7k5y.pdb ABCDEFGHMNU IJ 0
Biounits:
7k5y.pdb1.pdb ABCDEFGHMNU IJ 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Histone Domain P68431_39-132 4.5e-47 1 CL0012 A 37 131 IJ  H-Bb H-Mj S-Bb L-Bb L-Mn 
CENP-T_C Domain P62805_19-99 4.9e-08 1 CL0012 B 25 98 IJ  H-Bb S-Bb L-Bb 
Histone Domain P04908_10-91 2.1e-16 1 CL0012 C 10 90 IJ  H-Bb S-Bb L-Bb L-Mn 
Histone Domain P06899_33-102 2.2e-22 1 CL0012 D 30 101 IJ  H-Bb S-Bb L-Bb L-Mn 
Histone Domain P68431_39-132 4.5e-47 1 CL0012 E 37 131 IJ  H-Bb S-Bb L-Bb L-Mn 
CENP-T_C Domain P62805_19-99 4.9e-08 1 CL0012 F 25 98 IJ  H-Bb S-Bb L-Bb 
Histone Domain P04908_10-91 2.1e-16 1 CL0012 G 10 90 IJ  H-Bb S-Bb L-Bb L-Mn 
Histone Domain P06899_33-102 2.2e-22 1 CL0012 H 30 101 IJ  H-Bb S-Bb L-Bb 
V-set Domain 2.1e-19 1 CL0011 M 25 126
V-set Domain 2.6e-13 1 CL0011 M 154 268
V-set Domain 2.1e-19 1 CL0011 N 25 126
V-set Domain 2.6e-13 1 CL0011 N 154 268
Linker_histone Domain P10412_37-108 1.9e-23 1 CL0123 U 36 107 I  H-Bb S-Bb 
Histone_H2A_C Family P04908_92-119 2.5e-17 1 No_clan C 91 118   
Histone_H2A_C Family P04908_92-119 2.5e-17 1 No_clan G 91 118   
SCOP domains
No SCOP domains
GO terms
No GO terms
Sequences
Download file with secondary structure created by Stride  
7k5y.pdb1.pdb:   [ download sequences in FASTA format ]
I (dna): 
Click "SHOW" for view sequence
J (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
E (protein): 
Click "SHOW" for view sequence
F (protein): 
Click "SHOW" for view sequence
G (protein): 
Click "SHOW" for view sequence
H (protein): 
Click "SHOW" for view sequence
M (protein): 
Click "SHOW" for view sequence
N (protein): 
Click "SHOW" for view sequence
U (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text