Interaction class
Class:  H-Bb H-Mj S-Bb 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with DNA backbone atoms (Bb).
Pfam families with interaction class  H-Bb H-Mj S-Bb 
Export table
Pfam Domain Family Number of structures Number of domains Interaction modes
z-alpha
(PF02295.19)
58 11  H-Bb H-Mj H-Mn S-Bb L-Bb 
 H-Bb H-Mj S-Bb 
 H-Bb H-Mj S-Bb L-Bb 
  
Forkhead
(PF00250.20)
43 15  H-Bb H-Mj S-Bb 
 H-Bb H-Mj S-Bb L-Bb 
 H-Bb H-Mj S-Bb L-Bb L-Mj 
 H-Bb H-Mj S-Bb L-Bb L-Mn 
  
All Pfam and SCOP domain families with determined protein-DNA interaction classes
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