Interaction class
Class:  H-Bb H-Mj S-Bb L-Bb L-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with DNA backbone atoms (Bb), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj).
Pfam families with interaction class  H-Bb H-Mj S-Bb L-Bb L-Mj 
Export table
Pfam Domain Family Number of structures Number of domains Interaction modes
GntR
(PF00392.23)
31 5  H-Bb H-Mj S-Bb L-Bb L-Mj 
 H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
  
Zn-ribbon_8
(PF09723.12)
3 3  H-Bb H-Mj S-Bb L-Bb L-Mj 
All Pfam and SCOP domain families with determined protein-DNA interaction classes
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