Interaction class
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Class: H-Bb H-Mj S-Mj L-Mj Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with the major groove of DNA (Mj), loop(s) (L) with the major groove of DNA (Mj). |
| Pfam Domain Family | Number of structures |
Number of domains |
Interaction modes |
| GATA (PF00320.26) |
28 | 7 |
H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj H-Bb H-Mj S-Bb S-Mj L-Mj H-Bb H-Mj H-Mn S-Bb S-Mj L-Bb L-Mj H-Bb H-Mj S-Mj L-Bb L-Mj L-Mn |
| All Pfam and SCOP domain families with determined protein-DNA interaction classes | |||
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