Interaction class
Class:  H-Bb H-Mn S-Bb S-Mn L-Bb L-Mn 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the minor groove of DNA (Mn), β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the minor groove of DNA (Mn), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the minor groove of DNA (Mn).
Pfam families with interaction class  H-Bb H-Mn S-Bb S-Mn L-Bb L-Mn 
Export table
Pfam Domain Family Number of structures Number of domains Interaction modes
RVT_1
(PF00078.29)
341 14  H-Bb H-Mn S-Bb S-Mj S-Mn L-Bb L-Mj L-Mn 
 H-Bb H-Mn S-Bb S-Mj S-Mn L-Bb L-Mn 
 H-Bb H-Mn S-Bb S-Mn L-Bb L-Mn 
  
All Pfam and SCOP domain families with determined protein-DNA interaction classes
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