Interaction class
Class:  H-Bb S-Bb L-Bb L-Mj L-Mn 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), β-strand(s) (S) with DNA backbone atoms (Bb), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj), loop(s) (L) with the minor groove of DNA (Mn).
Pfam families with interaction class  H-Bb S-Bb L-Bb L-Mj L-Mn 
Export table
Pfam Domain Family Number of structures Number of domains Interaction modes
152 11  H-Bb H-Mj H-Mn S-Bb L-Bb L-Mj L-Mn 
 H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj L-Mn 
 H-Bb S-Bb L-Bb L-Mj L-Mn 
 H-Bb S-Bb S-Mn L-Bb L-Mj L-Mn 
45 6  H-Bb S-Bb L-Bb L-Mj L-Mn 
All Pfam and SCOP domain families with determined protein-DNA interaction classes
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