Interaction class
Class:  S-Bb S-Mj L-Bb L-Mj 
Description: Conserved protein-DNA contacts are provided by β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the major groove of DNA (Mj), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj).
Pfam families with interaction class  S-Bb S-Mj L-Bb L-Mj 
Export table
Pfam Domain Family Number of structures Number of domains Interaction modes
T-box
(PF00907.21)
22 8  H-Bb H-Mn S-Bb S-Mj L-Bb L-Mj 
 H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn 
 S-Bb S-Mj L-Bb L-Mj L-Mn 
  
All Pfam and SCOP domain families with determined protein-DNA interaction classes
© NPIDB team 2003 - 2019

text