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Nucleic atom dist Protein atom
DT4001:A.O5'/1 2.69 SER429:N.O/1
DG4003:A.N7/1 3.18 ARG430:N.NH1/1
DG4003:A.O6/1 3.02 ARG430:N.NH2/1
DG4004:A.N7/1 2.98 ARG421:N.NH1/1
DG4004:A.N7/1 3.38 ARG421:N.NH2/1
DG4004:A.O6/1 2.86 ARG421:N.NH2/1
DA4005:A.N7/1 3.1 GLN571:N.NE2/1
DA4005:A.N6/1 3.43 ARG421:N.NH2/1
DA4005:A.N6/1 2.94 GLN571:N.OE1/1
DT4009:A.OP2/1 3.29 ARG271:J.NH2/1
DT4010:A.O2/1 3.11 ARG537:N.NH2/1
DT4011:A.OP1/1 3.16 ARG282:J.NH1/1
DT4011:A.OP2/1 2.77 SER279:J.OG/1
DT4013:A.OP2/1 2.81 ARG155:F.NH2/1
DC4016:A.OP1/1 2.7 ARG144:F.NH2/1
DC4016:A.OP2/1 2.68 ARG144:F.NE/1
DC4016:A.N4/1 2.73 ASN147:F.OD1/1
DA5005:B.N6/1 3.33 ASN147:F.ND2/1
DT5006:B.OP2/1 2.67 SER154:F.OG/1
DT5006:B.O4/1 2.87 ASN147:F.ND2/1
DG5007:B.OP2/1 3.39 ARG158:F.NH2/1
DA5008:B.OP2/1 3.01 ARG280:J.NH2/1
DA5008:B.O5'/1 3.18 ARG280:J.NH2/1
DA5009:B.OP1/1 3.11 ARG273:J.NE/1
DC5011:B.OP2/1 3.38 ARG269:J.NE/1
DT5015:B.OP2/1 2.98 ARG572:N.NH2/1
DT5015:B.O5'/1 3.18 ARG572:N.NH1/1
DT5015:B.O4'/1 2.87 ARG537:N.NH2/1
DT5016:B.OP1/1 2.8 LYS538:N.N/1
DT5017:B.OP1/1 2.9 ASN523:N.N/1
DT5017:B.OP2/1 2.66 TYR424:N.OH/1
DT5017:B.OP2/1 2.87 LYS520:N.NZ/1
DT5018:B.OP1/1 2.81 ARG522:N.NE/1
DT5018:B.OP2/1 2.99 THR426:N.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT4011:A.O4/1 2.72 6020:A/1 3.04 ASN272:J.O/1
DT4011:A.O4/1 2.72 6020:A/1 3.24 ASN272:J.OD1/1
DA5005:B.N7/1 2.9 6012:B/1 2.92 ASN147:F.ND2/1
DA5005:B.N6/1 3.14 6012:B/1 2.92 ASN147:F.ND2/1
DA5009:B.N6/1 2.98 6015:J/1 2.73 ARG280:J.NH1/1
DA5012:B.N7/1 2.78 6031:B/1 3.37 ASN272:J.ND2/1
DA5012:B.N6/1 3.21 6031:B/1 3.37 ASN272:J.ND2/1
DT5016:B.OP1/1 2.83 6088:B/1 2.94 ASN523:N.OD1/1
DT5016:B.OP1/1 2.83 6088:B/1 3.02 GLY536:N.O/1
DT5016:B.OP1/1 2.93 6073:N/1 2.96 THR540:N.OG1/1
DT5016:B.OP1/1 2.93 6073:N/1 2.8 SER573:N.OG/1
DT5017:B.OP1/1 2.92 6061:B/1 3.14 ALA524:N.N/1
DT5017:B.O4/1 2.76 6051:B/1 3.1 GLN571:N.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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