|
Nucleic atom
|
dist
|
Protein atom
|
|
DT4001:A.O5'/1
|
2.69
|
SER429:N.O/1
|
|
DG4003:A.N7/1
|
3.18
|
ARG430:N.NH1/1
|
|
DG4003:A.O6/1
|
3.02
|
ARG430:N.NH2/1
|
|
DG4004:A.N7/1
|
2.98
|
ARG421:N.NH1/1
|
|
DG4004:A.N7/1
|
3.38
|
ARG421:N.NH2/1
|
|
DG4004:A.O6/1
|
2.86
|
ARG421:N.NH2/1
|
|
DA4005:A.N7/1
|
3.1
|
GLN571:N.NE2/1
|
|
DA4005:A.N6/1
|
3.43
|
ARG421:N.NH2/1
|
|
DA4005:A.N6/1
|
2.94
|
GLN571:N.OE1/1
|
|
DT4009:A.OP2/1
|
3.29
|
ARG271:J.NH2/1
|
|
DT4010:A.O2/1
|
3.11
|
ARG537:N.NH2/1
|
|
DT4011:A.OP1/1
|
3.16
|
ARG282:J.NH1/1
|
|
DT4011:A.OP2/1
|
2.77
|
SER279:J.OG/1
|
|
DT4013:A.OP2/1
|
2.81
|
ARG155:F.NH2/1
|
|
DC4016:A.OP1/1
|
2.7
|
ARG144:F.NH2/1
|
|
DC4016:A.OP2/1
|
2.68
|
ARG144:F.NE/1
|
|
DC4016:A.N4/1
|
2.73
|
ASN147:F.OD1/1
|
|
DA5005:B.N6/1
|
3.33
|
ASN147:F.ND2/1
|
|
DT5006:B.OP2/1
|
2.67
|
SER154:F.OG/1
|
|
DT5006:B.O4/1
|
2.87
|
ASN147:F.ND2/1
|
|
DG5007:B.OP2/1
|
3.39
|
ARG158:F.NH2/1
|
|
DA5008:B.OP2/1
|
3.01
|
ARG280:J.NH2/1
|
|
DA5008:B.O5'/1
|
3.18
|
ARG280:J.NH2/1
|
|
DA5009:B.OP1/1
|
3.11
|
ARG273:J.NE/1
|
|
DC5011:B.OP2/1
|
3.38
|
ARG269:J.NE/1
|
|
DT5015:B.OP2/1
|
2.98
|
ARG572:N.NH2/1
|
|
DT5015:B.O5'/1
|
3.18
|
ARG572:N.NH1/1
|
|
DT5015:B.O4'/1
|
2.87
|
ARG537:N.NH2/1
|
|
DT5016:B.OP1/1
|
2.8
|
LYS538:N.N/1
|
|
DT5017:B.OP1/1
|
2.9
|
ASN523:N.N/1
|
|
DT5017:B.OP2/1
|
2.66
|
TYR424:N.OH/1
|
|
DT5017:B.OP2/1
|
2.87
|
LYS520:N.NZ/1
|
|
DT5018:B.OP1/1
|
2.81
|
ARG522:N.NE/1
|
|
DT5018:B.OP2/1
|
2.99
|
THR426:N.OG1/1
|
|
|
|
Nucleic atom
|
d_n2w
|
water
|
d_p2w
|
Protein atom
|
|
DT4011:A.O4/1
|
2.72
|
6020:A/1
|
3.04
|
ASN272:J.O/1
|
|
DT4011:A.O4/1
|
2.72
|
6020:A/1
|
3.24
|
ASN272:J.OD1/1
|
|
DA5005:B.N7/1
|
2.9
|
6012:B/1
|
2.92
|
ASN147:F.ND2/1
|
|
DA5005:B.N6/1
|
3.14
|
6012:B/1
|
2.92
|
ASN147:F.ND2/1
|
|
DA5009:B.N6/1
|
2.98
|
6015:J/1
|
2.73
|
ARG280:J.NH1/1
|
|
DA5012:B.N7/1
|
2.78
|
6031:B/1
|
3.37
|
ASN272:J.ND2/1
|
|
DA5012:B.N6/1
|
3.21
|
6031:B/1
|
3.37
|
ASN272:J.ND2/1
|
|
DT5016:B.OP1/1
|
2.83
|
6088:B/1
|
2.94
|
ASN523:N.OD1/1
|
|
DT5016:B.OP1/1
|
2.83
|
6088:B/1
|
3.02
|
GLY536:N.O/1
|
|
DT5016:B.OP1/1
|
2.93
|
6073:N/1
|
2.96
|
THR540:N.OG1/1
|
|
DT5016:B.OP1/1
|
2.93
|
6073:N/1
|
2.8
|
SER573:N.OG/1
|
|
DT5017:B.OP1/1
|
2.92
|
6061:B/1
|
3.14
|
ALA524:N.N/1
|
|
DT5017:B.O4/1
|
2.76
|
6051:B/1
|
3.1
|
GLN571:N.OE1/1
|
|
|
Hbonds:
Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Dist is distance from nucleic atom to protein atom in angstroms (Å).
W-Bridges:
W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Water is water molecule.
d_n2w is distance from nucleic atom to water molecule (Å).
d_p2w is distance from protein atom to water molecule (Å).
CluD:
CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
Core number is serial number of cluster.
Atoms is number of detected atoms in the cluster.
