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Nucleic atom dist Protein atom
DA1401:C.O5'/1 3.12 ARG1283:B.NH1/1
DT1410:C.O2/1 3.14 SER159:A.OG/1
5IU1411:C.OP1/1 2.79 ARG140:A.NH2/1
DA1415:C.OP1/1 2.43 SER62:A.OG/1
DC1419:E.OP1/1 2.91 ARG1188:B.NH1/1
DA1423:E.OP1/1 2.7 HIS49:A.NE2/1
DA1423:E.N3/1 3.11 ASN13:A.ND2/1
DA1427:E.OP1/1 2.59 SER153:A.OG/1
DG1428:E.OP1/1 3.03 LYS1245:B.NZ/1
DT1429:E.OP1/1 3.13 SER1246:B.N/1
DT1429:E.OP1/1 3.03 SER1246:B.OG/1
DT1429:E.OP2/1 3.09 ARG1285:B.NE/1
DT1429:E.OP2/1 2.91 ARG1285:B.NH2/1
DA1430:E.OP2/1 3.08 THR1278:B.N/1
DA1430:E.OP2/1 3.12 THR1278:B.OG1/1
DA1430:E.OP2/1 2.54 THR1281:B.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
5IU1412:C.OP1/1 3.01 1650:A/1 2.65 LYS145:A.O/1
5IU1412:C.OP1/1 3.02 1712:A/1 2.9 LYS145:A.NZ/1
DA1425:E.OP1/1 2.7 1585:E/1 2.77 LYS71:A.NZ/1
DG1428:E.OP1/1 2.69 1606:E/1 2.91 SER1243:B.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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