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Nucleic atom dist Protein atom
A24:B.N6/1 2.99 LYS22:A.NZ/1
A24:B.N6/1 3.01 VAL44:A.O/1
G25:B.O4'/1 3.3 LEU48:A.N/1
U41:B.O2/1 2.45 ASN15:A.OD1/1
G42:B.N2/1 3.08 LEU48:A.O/1
C43:B.O2/1 3.26 LYS87:A.N/1
C43:B.N3/1 3.35 TYR85:A.O/1
C45:B.N3/1 3.22 SER90:A.OG/1
C45:B.N4/1 2.5 ASP89:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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