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Nucleic atom dist Protein atom
DC3:A.OP1/1 2.9 LYS74:C.NZ/1
DC3:A.OP1/1 2.77 PHE80:C.N/1
DC3:A.OP2/1 2.55 TYR56:C.OH/1
DA4:A.OP2/1 2.71 TYR67:C.OH/1
DG5:A.N7/1 3.4 ARG64:C.NH1/1
DG5:A.O6/1 3.14 ARG64:C.NH1/1
DG6:A.N7/1 3 ARG61:C.NH2/1
DG6:A.O6/1 2.69 ARG61:C.NE/1
DA13:B.OP2/1 3.14 LYS69:C.NZ/1
DC14:B.OP1/1 2.92 LEU7:C.N/1
DC14:B.OP2/1 2.52 TYR66:C.OH/1
DA15:B.OP2/1 2.9 TRP45:C.NE1/1
DA15:B.N6/1 3 TYR65:C.OH/1
DT16:B.OP2/1 2.72 LYS58:C.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:A.OP1/1 2.87 122:C/1 2.83 GLU39:C.OE2/1
DA4:A.OP1/1 2.95 126:C/1 2.7 ASN76:C.OD1/1
DA4:A.OP2/1 2.83 125:C/1 3.17 ARG64:C.NE/1
DA4:A.OP2/1 2.83 125:C/1 2.78 TYR82:C.OH/1
DG5:A.OP2/1 2.71 18:A/1 3.22 ARG64:C.O/1
DA7:A.N7/1 2.93 116:A/1 3.12 TYR65:C.OH/1
DT8:A.O4/1 2.71 15:A/1 2.75 TYR65:C.OH/1
DC14:B.OP1/1 2.76 23:B/1 2.95 ILE5:C.O/1
DC14:B.O5'/1 2.89 96:C/1 2.55 ALA62:C.O/1
DA15:B.OP2/1 2.77 25:B/1 2.81 LYS58:C.O/1
DT16:B.OP1/1 2.57 40:B/1 3.04 ASN53:C.N/1
DT16:B.OP1/1 2.97 43:B/1 3.27 ASN53:C.ND2/1
DC17:B.OP2/1 2.75 146:C/1 2.7 LYS58:C.NZ/1
DC17:B.N4/1 3.09 140:C/1 2.73 ASP57:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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