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Nucleic atom dist Protein atom
DA2:E.OP2/1 2.79 MET4:A.O/1
DT3:E.OP2/1 3.26 MET1:A.N/1
DA4:E.OP1/1 2.82 VAL33:A.N/1
DA4:E.N7/1 3.15 ARG13:B.NH1/1
DA4:E.N6/1 3.36 ARG13:B.NH2/1
DG5:E.OP1/1 3.21 ARG23:A.NH1/1
DG5:E.OP2/1 2.74 ARG23:A.NH1/1
DT6:E.O4/1 3.19 ASN11:B.OD1/1
DA7:E.N7/1 3.07 GLN9:B.NE2/1
DA7:E.N6/1 2.86 GLN9:B.OE1/1
DC13:E.OP1/1 2.83 GLY3:D.N/1
DC13:E.OP2/1 3.23 SER5:D.N/1
DC13:E.OP2/1 2.51 SER5:D.OG/1
DT14:E.OP2/1 2.94 MET1:D.N/1
DT15:E.OP1/1 2.76 VAL33:D.N/1
DT15:E.OP2/1 3 ASN34:D.N/1
DC16:E.OP1/1 3.15 ARG23:D.NH2/1
DC16:E.N4/1 2.7 ASN11:C.OD1/1
DA18:E.N7/1 3.12 GLN9:C.NE2/1
DA18:E.N6/1 3.45 GLN9:C.NE2/1
DA2:F.OP1/1 2.83 GLY3:C.N/1
DA2:F.OP2/1 2.89 SER5:C.OG/1
DT3:F.OP2/1 3.23 MET1:C.O/1
DG4:F.OP1/1 2.66 VAL33:C.N/1
DG4:F.OP2/1 3.4 ASN34:C.N/1
DG4:F.N7/1 3.46 ARG13:D.NH1/1
DA5:F.OP1/1 2.78 ARG23:C.NE/1
DA5:F.OP1/1 2.73 ARG23:C.NH2/1
DA5:F.OP2/1 3.03 ARG23:C.NH2/1
DT6:F.O4/1 2.65 ASN11:D.ND2/1
DA7:F.N7/1 3 GLN9:D.OE1/1
DA7:F.N7/1 2.92 GLN9:D.NE2/1
DA7:F.N6/1 3.05 GLN9:D.OE1/1
DA13:F.OP1/1 3.05 GLY3:B.N/1
DA13:F.OP2/1 2.97 SER5:B.N/1
DA13:F.OP2/1 2.49 SER5:B.OG/1
DC14:F.OP2/1 2.81 MET1:B.N/1
DT15:F.OP1/1 2.77 VAL33:B.N/1
DT15:F.OP2/1 3.03 ASN34:B.N/1
DT15:F.O4/1 3.24 ARG13:A.NH2/1
DC16:F.OP1/1 2.63 ARG23:B.NH1/1
DC16:F.N4/1 2.79 ASN11:A.OD1/1
DA18:F.N6/1 2.81 GLN9:A.OE1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:E.OP2/1 2.95 101:A/1 2.53 SER32:A.OG/1
DT3:E.OP2/1 2.95 101:A/1 2.61 SER35:A.OG/1
DG5:E.OP2/1 2.58 141:E/1 3.01 GLN9:B.O/1
DG5:E.N7/1 2.89 139:E/1 3.33 ASN11:B.N/1
DG5:E.O6/1 2.78 140:E/1 2.89 ARG13:B.NH2/1
DT6:E.OP2/1 2.82 102:E/1 3 GLN9:B.N/1
DG8:E.N7/1 3.32 103:A/1 2.99 ARG13:A.NH1/1
DT14:E.OP1/1 2.98 109:D/1 2.76 SER32:D.N/1
DA5:F.N7/1 2.84 126:F/1 3.34 ASN11:D.N/1
DA5:F.N7/1 2.88 148:F/1 3.44 ARG13:D.NH1/1
DA5:F.N6/1 2.72 148:F/1 3.44 ARG13:D.NH1/1
DT6:F.OP2/1 3.09 179:D/1 2.74 GLN9:D.N/1
DC14:F.OP1/1 3.01 107:B/1 2.69 SER32:B.N/1
DC14:F.OP2/1 2.82 108:B/1 3.17 ASN34:B.ND2/1
DC14:F.OP2/1 2.82 108:B/1 2.51 SER35:B.OG/1
DC16:F.OP2/1 2.57 105:F/1 2.93 GLN9:A.O/1
DC16:F.OP2/1 2.69 104:F/1 2.86 ASN11:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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