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Nucleic atom dist Protein atom
DG103:B.N2/1 2.88 SER31:A.OG/1
DG103:B.N3/1 3.02 TRP24:A.NE1/1
DT105:B.OP1/1 2.85 LYS22:A.NZ/1
DT105:B.O2/1 2.99 ARG43:A.NH1/1
DC106:B.O2/1 2.88 ARG43:A.NH1/1
DC114:C.OP1/1 2.59 LYS9:A.N/1
DG115:C.N2/1 3.1 VAL26:A.O/1
DC116:C.OP1/1 2.86 SER47:A.OG/1
DC116:C.OP1/1 3.03 LYS49:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC106:B.OP1/1 2.54 1058:B/1 3.2 LYS21:A.NZ/1
DG107:B.OP1/1 2.76 1025:A/1 2.75 THR41:A.O/1
DG107:B.OP2/1 2.67 1004:B/1 3 THR41:A.N/1
DG115:C.OP1/1 2.86 1018:A/1 3.4 LYS7:A.N/1
DG115:C.OP1/1 2.86 1018:A/1 2.6 ALA45:A.O/1
DG115:C.N2/1 2.93 1128:C/1 3.21 LYS28:A.N/1
DG115:C.N3/1 2.7 1128:C/1 3.21 LYS28:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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