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Nucleic atom dist Protein atom
DT504:C.OP2/1 2.55 TYR124:B.OH/1
DC505:C.OP2/1 3.19 ASN128:B.ND2/1
DC505:C.O2/1 2.95 ARG17:A.NH2/1
DG506:C.OP2/1 3.12 LEU22:A.N/1
DG506:C.O4'/1 3.16 ARG17:A.NE/1
DG506:C.O4'/1 2.81 ARG17:A.NH2/1
DG506:C.N7/1 2.98 ARG121:B.NH2/1
DG506:C.O6/1 3.3 ARG121:B.NE/1
DG508:C.N7/1 3.24 ARG57:A.NH1/1
DG508:C.O6/1 2.7 ARG57:A.NH2/1
DT515:C.O3'/1 3.23 LYS76:A.NZ/1
DA604:D.OP1/1 3.3 LYS44:A.NZ/1
DC605:D.OP1/1 2.47 ASN77:A.N/1
DC605:D.OP2/1 2.63 TYR59:A.OH/1
DC606:D.OP1/1 2.62 ARG72:B.NH2/1
DG607:D.OP2/1 3.11 LEU71:B.N/1
DG607:D.N7/1 3 ARG56:A.NH2/1
DG607:D.O6/1 3.04 ARG56:A.NE/1
DC608:D.OP1/1 3.02 LYS69:B.NZ/1
DC608:D.N4/1 3.43 ARG56:A.NH2/1
DG609:D.OP2/1 3.06 ASN118:B.ND2/1
DG609:D.N7/1 3.09 ARG122:B.NH2/1
DG609:D.O6/1 2.9 ARG122:B.NH2/1
DA614:D.OP1/1 2.89 SER16:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG506:C.OP2/1 2.91 171:B/1 2.9 ASP125:B.OD1/1
DG506:C.OP2/1 2.91 171:B/1 3.29 ASN128:B.ND2/1
DC606:D.OP2/1 2.55 46:D/1 3.16 THR62:A.OG1/1
DC606:D.OP2/1 2.55 46:D/1 2.69 GLU66:A.OE1/1
DC606:D.OP2/1 2.55 46:D/1 2.81 GLU66:A.OE2/1
DA615:D.O3'/1 3.22 178:B/1 2.97 LYS141:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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