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Nucleic atom dist Protein atom
DA406:B.N3/1 3.52 ARG313:A.NH2/1
DA407:B.OP2/1 2.93 GLN242:A.N/1
DA408:B.OP2/1 2.66 TYR244:A.N/1
DA408:B.N3/1 3.01 GLY312:A.N/1
DG409:B.OP1/1 2.62 ARG303:A.N/1
DG409:B.OP2/1 2.55 TYR244:A.OH/1
DG409:B.O6/1 2.56 LYS253:A.NZ/1
DT423:C.OP1/1 3.04 GLN285:A.OE1/1
DT423:C.OP2/1 3.03 ARG258:A.NE/1
DT423:C.OP2/1 2.68 ARG258:A.NH2/1
DT423:C.O5'/1 3.12 ARG258:A.NH2/1
DG424:C.OP1/1 2.77 ARG281:A.NE/1
DG424:C.OP1/1 2.75 ARG281:A.NH2/1
DG424:C.OP1/1 3.27 ASN282:A.ND2/1
DG424:C.OP2/1 3.11 ARG288:A.NH1/1
DG424:C.OP2/1 2.83 ARG288:A.NH2/1
DG424:C.N7/1 3.3 ARG258:A.NH1/1
DC426:C.N4/1 2.87 GLU250:A.OE1/1
DT428:C.O2/1 2.99 ARG311:A.NH1/1
DT430:C.O2/1 2.61 ARG313:A.N/1
DT431:C.OP1/1 2.76 ARG310:A.NH2/1
DC432:C.OP1/1 2.65 SER316:A.N/1
DC432:C.OP1/1 2.76 LYS317:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA408:B.OP2/1 3.1 2:A/1 2.88 HIS243:A.ND1/1
DG409:B.OP1/1 2.51 29:B/1 2.88 GLN261:A.NE2/1
DG409:B.OP1/1 2.51 29:B/1 2.78 ARG303:A.O/1
DG424:C.OP2/1 2.56 9:A/1 2.17 GLY251:A.O/1
DA425:C.OP2/1 2.61 3:A/1 2.61 GLY251:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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