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Nucleic atom dist Protein atom
DA-8:F.O5'/1 3.13 TYR153:A.OH/2
DT-7:F.OP2/1 2.94 TYR153:A.OH/2
DT-7:F.OP2/1 3.33 ARG263:A.NH2/2
DC-6:F.OP1/1 2.76 ARG186:A.N/2
DC-6:F.OP1/1 2.74 SER187:A.N/2
DG-5:F.N7/1 3.42 ARG279:A.NH1/2
DG-5:F.O6/1 2.83 ARG279:A.NH2/2
DC-4:F.OP2/1 2.74 ARG269:A.N/2
DC-4:F.N4/1 2.82 LYS266:A.O/2
DC-3:F.OP1/1 3.46 LYS73:A.NZ/2
DC-3:F.O2/1 3.21 LYS73:A.N/2
DC-3:F.N4/1 3.32 LYS266:A.O/2
DT-2:F.O4'/1 2.9 GLY72:A.N/2
DA0:F.OP1/1 2.72 LEU69:A.N/2
DT1:F.OP1/1 2.86 ASN160:A.ND2/1
DA2:F.OP1/1 2.91 ASP116:A.OD1/1
DA2:F.OP2/1 2.97 GLN161:A.NE2/1
DG3:F.OP1/1 3.1 SER145:A.N/1
DG3:F.N7/1 2.97 ARG277:A.NH1/1
DG3:F.O6/1 2.59 ARG277:A.NH2/1
DG4:F.OP1/1 2.73 TYR218:A.OH/1
DG4:F.OP2/1 2.63 GLY147:A.N/1
DG4:F.N7/1 2.85 LYS266:A.NZ/1
DG4:F.N2/1 3.48 LYS73:A.N/1
DC5:F.OP1/1 2.83 LYS76:A.N/1
DC5:F.OP2/1 2.67 ARG149:A.NH1/1
DC5:F.N4/1 3.2 ASP150:A.OD1/1
DG6:F.OP1/1 2.63 LYS76:A.NZ/1
DA-8:F.O5'/2 3.13 TYR153:A.OH/1
DT-7:F.OP2/2 2.94 TYR153:A.OH/1
DT-7:F.OP2/2 3.33 ARG263:A.NH2/1
DC-6:F.OP1/2 2.76 ARG186:A.N/1
DC-6:F.OP1/2 2.74 SER187:A.N/1
DG-5:F.N7/2 3.42 ARG279:A.NH1/1
DG-5:F.O6/2 2.83 ARG279:A.NH2/1
DC-4:F.OP2/2 2.74 ARG269:A.N/1
DC-4:F.N4/2 2.82 LYS266:A.O/1
DC-3:F.OP1/2 3.46 LYS73:A.NZ/1
DC-3:F.O2/2 3.21 LYS73:A.N/1
DC-3:F.N4/2 3.32 LYS266:A.O/1
DT-2:F.O4'/2 2.9 GLY72:A.N/1
DA0:F.OP1/2 2.72 LEU69:A.N/1
DT1:F.OP1/2 2.86 ASN160:A.ND2/2
DA2:F.OP1/2 2.91 ASP116:A.OD1/2
DA2:F.OP2/2 2.97 GLN161:A.NE2/2
DG3:F.OP1/2 3.1 SER145:A.N/2
DG3:F.N7/2 2.97 ARG277:A.NH1/2
DG3:F.O6/2 2.59 ARG277:A.NH2/2
DG4:F.OP1/2 2.73 TYR218:A.OH/2
DG4:F.OP2/2 2.63 GLY147:A.N/2
DG4:F.N7/2 2.85 LYS266:A.NZ/2
DG4:F.N2/2 3.48 LYS73:A.N/2
DC5:F.OP1/2 2.83 LYS76:A.N/2
DC5:F.OP2/2 2.67 ARG149:A.NH1/2
DC5:F.N4/2 3.2 ASP150:A.OD1/2
DG6:F.OP1/2 2.63 LYS76:A.NZ/2
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Nucleic atom d_n2w water d_p2w Protein atom
DT-7:F.OP2/1 2.89 463:A/2 2.62 ARG263:A.NH1/2
DC-6:F.OP2/1 2.71 442:A/2 2.93 ARG263:A.NH1/2
DC-6:F.OP2/1 2.71 442:A/2 3.01 PRO264:A.O/2
DC-3:F.N4/1 2.98 419:A/2 3.14 ASP267:A.OD2/2
DC-3:F.N4/1 2.98 419:A/2 2.93 ASP268:A.N/2
DT-2:F.O4/1 2.79 420:A/2 2.83 ASP268:A.OD1/2
DA-1:F.N3/1 2.98 316:A/2 3.03 ARG71:A.NH1/2
DA0:F.OP1/1 3.01 21:F/1 3.09 ASN160:A.ND2/1
DA0:F.O4'/1 2.88 316:A/2 3.03 ARG71:A.NH1/2
DA0:F.N7/1 3.01 502:A/1 2.62 LYS271:A.NZ/1
DT1:F.OP1/1 2.79 20:F/1 3.11 GLY114:A.N/1
DT1:F.OP1/1 3.2 329:A/1 2.81 GLY114:A.O/1
DT1:F.OP1/1 2.79 20:F/1 3.4 ASN160:A.ND2/1
DT1:F.OP1/1 3.2 329:A/1 2.69 GLN161:A.NE2/1
DT1:F.OP1/1 2.79 20:F/1 2.86 GLU84:A.OE2/2
DT1:F.OP2/1 3.07 321:A/1 2.84 SER158:A.OG/1
DT1:F.OP2/1 3.03 475:A/1 2.96 ASN160:A.N/1
DA2:F.OP1/1 2.98 306:A/1 2.85 ASP116:A.OD1/1
DA2:F.OP1/1 2.98 306:A/1 2.71 ASP142:A.OD2/1
DA2:F.N6/1 3.15 465:A/1 2.38 ASP267:A.OD2/1
DA2:F.N3/1 2.92 315:A/1 2.75 ARG71:A.NH1/1
DG3:F.OP1/1 2.72 308:A/1 2.7 ILE83:A.O/1
DG3:F.OP1/1 2.72 308:A/1 2.66 SER145:A.OG/1
DG3:F.OP2/1 2.59 10:F/1 2.84 LYS144:A.NZ/1
DG3:F.OP2/1 3.18 401:A/1 2.84 SER145:A.O/1
DG3:F.N2/1 3.23 16:F/1 2.87 ARG71:A.O/1
DG4:F.OP1/1 2.62 13:F/1 2.96 GLN79:A.NE2/1
DG4:F.OP1/1 2.62 13:F/1 3.07 TRP82:A.N/1
DG4:F.OP2/1 2.79 24:F/1 3.17 GLY147:A.N/1
DG4:F.OP2/1 2.79 24:F/1 3.02 ARG149:A.N/1
DG4:F.O4'/1 2.66 16:F/1 2.87 ARG71:A.O/1
DG4:F.N3/1 3.06 314:A/1 2.72 LYS73:A.O/1
DC5:F.OP1/1 2.64 14:F/1 2.71 GLY77:A.N/1
DG6:F.OP1/1 2.9 392:A/1 2.36 MET74:A.O/1
DT-7:F.OP2/2 2.89 463:A/1 2.62 ARG263:A.NH1/1
DC-6:F.OP2/2 2.71 442:A/1 2.93 ARG263:A.NH1/1
DC-6:F.OP2/2 2.71 442:A/1 3.01 PRO264:A.O/1
DC-3:F.N4/2 2.98 419:A/1 3.14 ASP267:A.OD2/1
DC-3:F.N4/2 2.98 419:A/1 2.93 ASP268:A.N/1
DT-2:F.O4/2 2.79 420:A/1 2.83 ASP268:A.OD1/1
DA-1:F.N3/2 2.98 316:A/1 3.03 ARG71:A.NH1/1
DA0:F.OP1/2 3.01 21:F/2 3.09 ASN160:A.ND2/2
DA0:F.O4'/2 2.88 316:A/1 3.03 ARG71:A.NH1/1
DA0:F.N7/2 3.01 502:A/2 2.62 LYS271:A.NZ/2
DT1:F.OP1/2 2.79 20:F/2 2.86 GLU84:A.OE2/1
DT1:F.OP1/2 2.79 20:F/2 3.11 GLY114:A.N/2
DT1:F.OP1/2 3.2 329:A/2 2.81 GLY114:A.O/2
DT1:F.OP1/2 2.79 20:F/2 3.4 ASN160:A.ND2/2
DT1:F.OP1/2 3.2 329:A/2 2.69 GLN161:A.NE2/2
DT1:F.OP2/2 3.07 321:A/2 2.84 SER158:A.OG/2
DT1:F.OP2/2 3.03 475:A/2 2.96 ASN160:A.N/2
DA2:F.OP1/2 2.98 306:A/2 2.85 ASP116:A.OD1/2
DA2:F.OP1/2 2.98 306:A/2 2.71 ASP142:A.OD2/2
DA2:F.N6/2 3.15 465:A/2 2.38 ASP267:A.OD2/2
DA2:F.N3/2 2.92 315:A/2 2.75 ARG71:A.NH1/2
DG3:F.OP1/2 2.72 308:A/2 2.7 ILE83:A.O/2
DG3:F.OP1/2 2.72 308:A/2 2.66 SER145:A.OG/2
DG3:F.OP2/2 2.59 10:F/2 2.84 LYS144:A.NZ/2
DG3:F.OP2/2 3.18 401:A/2 2.84 SER145:A.O/2
DG3:F.N2/2 3.23 16:F/2 2.87 ARG71:A.O/2
DG4:F.OP1/2 2.62 13:F/2 2.96 GLN79:A.NE2/2
DG4:F.OP1/2 2.62 13:F/2 3.07 TRP82:A.N/2
DG4:F.OP2/2 2.79 24:F/2 3.17 GLY147:A.N/2
DG4:F.OP2/2 2.79 24:F/2 3.02 ARG149:A.N/2
DG4:F.O4'/2 2.66 16:F/2 2.87 ARG71:A.O/2
DG4:F.N3/2 3.06 314:A/2 2.72 LYS73:A.O/2
DC5:F.OP1/2 2.64 14:F/2 2.71 GLY77:A.N/2
DG6:F.OP1/2 2.9 392:A/2 2.36 MET74:A.O/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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