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Nucleic atom dist Protein atom
DT3:B.O2/1 2.58 LYS244:A.NZ/1
DC6:B.OP1/1 2.97 ARG159:A.NH1/1
DC6:B.OP1/1 3.24 VAL242:A.N/1
DC6:B.OP2/1 3.11 ARG159:A.NH2/1
DT7:B.OP2/1 2.89 SER257:A.N/1
DT7:B.OP2/1 2.62 SER257:A.OG/1
DT11:B.OP2/1 2.46 SER47:A.OG/1
DT11:B.OP2/1 2.34 ARG50:A.NH1/1
DA12:B.OP1/1 2.93 ARG81:A.NH1/1
DA12:B.OP2/1 2.85 ARG81:A.NH2/1
DA12:B.N3/1 2.6 ARG282:A.NH2/1
DT13:B.OP2/1 2.68 ALA84:A.N/1
DT13:B.OP2/1 2.79 THR87:A.OG1/1
DT13:B.O4/1 2.85 GLN90:A.NE2/1
DA14:B.OP1/1 2.73 LYS132:A.N/1
DG15:B.OP1/1 2.88 GLN133:A.NE2/1
DG15:B.OP2/1 2.52 ARG326:A.NH1/1
DG15:B.OP2/1 2.76 ARG326:A.NH2/1
DG15:B.O6/1 2.79 LYS86:A.NZ/1
DC16:B.OP2/1 2.85 TRP315:A.NE1/1
DT4:C.OP2/1 2.27 ARG121:A.NH2/1
DG5:C.OP1/1 2.28 ARG106:A.NH1/1
DG5:C.OP2/1 3.29 ASN96:A.ND2/1
DC6:C.OP1/1 2.4 ARG100:A.NH2/1
DT7:C.OP2/1 3.26 SER38:A.N/1
DT7:C.OP2/1 3 SER38:A.OG/1
DT7:C.OP2/1 2.43 THR41:A.OG1/1
DT7:C.O4/1 2.96 GLN90:A.NE2/1
DA8:C.O3'/1 2.89 ARG173:A.NH1/1
DT9:C.OP1/1 2.88 ALA175:A.N/1
DT9:C.O4/1 3.29 LYS43:A.NZ/1
DA10:C.OP1/1 2.72 SER287:A.OG/1
DA10:C.OP2/1 2.55 GLU262:A.OE2/1
DA10:C.OP2/1 2.91 GLY288:A.N/1
DA10:C.O4'/1 3.16 ARG282:A.NH1/1
DC11:C.OP1/1 2.67 TYR283:A.N/1
DG12:C.N7/1 2.66 ARG259:A.NH2/1
DG12:C.O6/1 2.61 ARG259:A.NE/1
DT17:C.O2/1 2.91 ARG243:A.NH2/1
DT19:C.OP1/1 2.85 ASN245:A.ND2/1
DT19:C.O2/1 2.6 LYS244:A.NZ/1
DT3:D.O2/1 2.58 LYS244:F.NZ/1
DC6:D.OP1/1 2.97 ARG159:F.NH1/1
DC6:D.OP1/1 3.24 VAL242:F.N/1
DC6:D.OP2/1 3.11 ARG159:F.NH2/1
DT7:D.OP2/1 2.89 SER257:F.N/1
DT7:D.OP2/1 2.62 SER257:F.OG/1
DT11:D.OP2/1 2.46 SER47:F.OG/1
DT11:D.OP2/1 2.34 ARG50:F.NH1/1
DA12:D.OP1/1 2.93 ARG81:F.NH1/1
DA12:D.OP2/1 2.85 ARG81:F.NH2/1
DA12:D.N3/1 2.6 ARG282:F.NH2/1
DT13:D.OP2/1 2.68 ALA84:F.N/1
DT13:D.OP2/1 2.79 THR87:F.OG1/1
DT13:D.O4/1 2.85 GLN90:F.NE2/1
DA14:D.OP1/1 2.73 LYS132:F.N/1
DG15:D.OP1/1 2.88 GLN133:F.NE2/1
DG15:D.OP2/1 2.52 ARG326:F.NH1/1
DG15:D.OP2/1 2.76 ARG326:F.NH2/1
DG15:D.O6/1 2.79 LYS86:F.NZ/1
DC16:D.OP2/1 2.85 TRP315:F.NE1/1
DT4:E.OP2/1 2.27 ARG121:F.NH2/1
DG5:E.OP1/1 2.28 ARG106:F.NH1/1
DG5:E.OP2/1 3.29 ASN96:F.ND2/1
DC6:E.OP1/1 2.4 ARG100:F.NH2/1
DT7:E.OP2/1 3.26 SER38:F.N/1
DT7:E.OP2/1 3 SER38:F.OG/1
DT7:E.OP2/1 2.43 THR41:F.OG1/1
DT7:E.O4/1 2.96 GLN90:F.NE2/1
DA8:E.O3'/1 2.89 ARG173:F.NH1/1
DT9:E.OP1/1 2.88 ALA175:F.N/1
DT9:E.O4/1 3.29 LYS43:F.NZ/1
DA10:E.OP1/1 2.72 SER287:F.OG/1
DA10:E.OP2/1 2.55 GLU262:F.OE2/1
DA10:E.OP2/1 2.91 GLY288:F.N/1
DA10:E.O4'/1 3.16 ARG282:F.NH1/1
DC11:E.OP1/1 2.67 TYR283:F.N/1
DG12:E.N7/1 2.66 ARG259:F.NH2/1
DG12:E.O6/1 2.61 ARG259:F.NE/1
DT17:E.O2/1 2.91 ARG243:F.NH2/1
DT19:E.OP1/1 2.85 ASN245:F.ND2/1
DT19:E.O2/1 2.6 LYS244:F.NZ/1
DT3:G.O2/1 2.58 LYS244:I.NZ/1
DC6:G.OP1/1 2.97 ARG159:I.NH1/1
DC6:G.OP1/1 3.24 VAL242:I.N/1
DC6:G.OP2/1 3.11 ARG159:I.NH2/1
DT7:G.OP2/1 2.89 SER257:I.N/1
DT7:G.OP2/1 2.62 SER257:I.OG/1
DT11:G.OP2/1 2.46 SER47:I.OG/1
DT11:G.OP2/1 2.34 ARG50:I.NH1/1
DA12:G.OP1/1 2.93 ARG81:I.NH1/1
DA12:G.OP2/1 2.85 ARG81:I.NH2/1
DA12:G.N3/1 2.6 ARG282:I.NH2/1
DT13:G.OP2/1 2.68 ALA84:I.N/1
DT13:G.OP2/1 2.79 THR87:I.OG1/1
DT13:G.O4/1 2.85 GLN90:I.NE2/1
DA14:G.OP1/1 2.73 LYS132:I.N/1
DG15:G.OP1/1 2.88 GLN133:I.NE2/1
DG15:G.OP2/1 2.52 ARG326:I.NH1/1
DG15:G.OP2/1 2.76 ARG326:I.NH2/1
DG15:G.O6/1 2.79 LYS86:I.NZ/1
DC16:G.OP2/1 2.85 TRP315:I.NE1/1
DT4:H.OP2/1 2.27 ARG121:I.NH2/1
DG5:H.OP1/1 2.28 ARG106:I.NH1/1
DG5:H.OP2/1 3.29 ASN96:I.ND2/1
DC6:H.OP1/1 2.4 ARG100:I.NH2/1
DT7:H.OP2/1 3.26 SER38:I.N/1
DT7:H.OP2/1 3 SER38:I.OG/1
DT7:H.OP2/1 2.43 THR41:I.OG1/1
DT7:H.O4/1 2.96 GLN90:I.NE2/1
DA8:H.O3'/1 2.89 ARG173:I.NH1/1
DT9:H.OP1/1 2.88 ALA175:I.N/1
DT9:H.O4/1 3.29 LYS43:I.NZ/1
DA10:H.OP1/1 2.72 SER287:I.OG/1
DA10:H.OP2/1 2.55 GLU262:I.OE2/1
DA10:H.OP2/1 2.91 GLY288:I.N/1
DA10:H.O4'/1 3.16 ARG282:I.NH1/1
DC11:H.OP1/1 2.67 TYR283:I.N/1
DG12:H.N7/1 2.66 ARG259:I.NH2/1
DG12:H.O6/1 2.61 ARG259:I.NE/1
DT17:H.O2/1 2.91 ARG243:I.NH2/1
DT19:H.OP1/1 2.85 ASN245:I.ND2/1
DT19:H.O2/1 2.6 LYS244:I.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:B.N3/1 3.05 434:A/1 3.31 ARG243:A.NH1/1
DA4:B.N3/1 3.05 434:A/1 2.85 LYS244:A.N/1
DA5:B.O4'/1 3.17 434:A/1 2.85 LYS244:A.N/1
DA5:B.O3'/1 3.08 360:A/1 2.66 ARG241:A.NE/1
DA5:B.O3'/1 3.08 360:A/1 2.81 ARG241:A.NH2/1
DA5:B.N3/1 2.53 24:B/1 2.56 ARG241:A.NH2/1
DC6:B.OP2/1 2.48 20:B/1 2.84 VAL242:A.O/1
DA12:B.OP2/1 3.01 424:A/1 2.83 HIS91:A.NE2/1
DA14:B.OP2/1 2.9 383:A/1 2.76 LYS86:A.N/1
DA14:B.N7/1 2.85 28:B/1 3.01 LYS86:A.O/1
DA14:B.N6/1 2.7 28:B/1 3.01 LYS86:A.O/1
DG15:B.OP1/1 2.75 17:B/1 2.76 ALA134:A.N/1
DC16:B.OP2/1 2.73 400:A/1 2.43 ILE320:A.O/1
DA1:C.O5'/1 3 351:F/1 3.39 THR316:F.N/1
DG5:C.O6/1 2.29 25:C/1 3.34 LYS86:A.NZ/1
DT9:C.OP2/1 2.92 21:C/1 3.09 HIS40:A.NE2/1
DT9:C.OP2/1 2.98 432:A/1 2.65 THR258:A.OG1/1
DC11:C.N4/1 2.94 370:A/1 2.6 GLU262:A.OE1/1
DA4:D.N3/1 3.05 434:F/1 3.31 ARG243:F.NH1/1
DA4:D.N3/1 3.05 434:F/1 2.85 LYS244:F.N/1
DA5:D.O4'/1 3.17 434:F/1 2.85 LYS244:F.N/1
DA5:D.O3'/1 3.08 360:F/1 2.66 ARG241:F.NE/1
DA5:D.O3'/1 3.08 360:F/1 2.81 ARG241:F.NH2/1
DA5:D.N3/1 2.53 24:D/1 2.56 ARG241:F.NH2/1
DC6:D.OP2/1 2.48 20:D/1 2.84 VAL242:F.O/1
DA12:D.OP2/1 3.01 424:F/1 2.83 HIS91:F.NE2/1
DA14:D.OP2/1 2.9 383:F/1 2.76 LYS86:F.N/1
DA14:D.N7/1 2.85 28:D/1 3.01 LYS86:F.O/1
DA14:D.N6/1 2.7 28:D/1 3.01 LYS86:F.O/1
DG15:D.OP1/1 2.75 17:D/1 2.76 ALA134:F.N/1
DC16:D.OP2/1 2.73 400:F/1 2.43 ILE320:F.O/1
DA1:E.O5'/1 3 351:I/1 3.39 THR316:I.N/1
DG5:E.O6/1 2.29 25:E/1 3.34 LYS86:F.NZ/1
DT9:E.OP2/1 2.92 21:E/1 3.09 HIS40:F.NE2/1
DT9:E.OP2/1 2.98 432:F/1 2.65 THR258:F.OG1/1
DC11:E.N4/1 2.94 370:F/1 2.6 GLU262:F.OE1/1
DA4:G.N3/1 3.05 434:I/1 3.31 ARG243:I.NH1/1
DA4:G.N3/1 3.05 434:I/1 2.85 LYS244:I.N/1
DA5:G.O4'/1 3.17 434:I/1 2.85 LYS244:I.N/1
DA5:G.O3'/1 3.08 360:I/1 2.66 ARG241:I.NE/1
DA5:G.O3'/1 3.08 360:I/1 2.81 ARG241:I.NH2/1
DA5:G.N3/1 2.53 24:G/1 2.56 ARG241:I.NH2/1
DC6:G.OP2/1 2.48 20:G/1 2.84 VAL242:I.O/1
DA12:G.OP2/1 3.01 424:I/1 2.83 HIS91:I.NE2/1
DA14:G.OP2/1 2.9 383:I/1 2.76 LYS86:I.N/1
DA14:G.N7/1 2.85 28:G/1 3.01 LYS86:I.O/1
DA14:G.N6/1 2.7 28:G/1 3.01 LYS86:I.O/1
DG15:G.OP1/1 2.75 17:G/1 2.76 ALA134:I.N/1
DC16:G.OP2/1 2.73 400:I/1 2.43 ILE320:I.O/1
DA1:H.O5'/1 3 351:A/1 3.39 THR316:A.N/1
DG5:H.O6/1 2.29 25:H/1 3.34 LYS86:I.NZ/1
DT9:H.OP2/1 2.92 21:H/1 3.09 HIS40:I.NE2/1
DT9:H.OP2/1 2.98 432:I/1 2.65 THR258:I.OG1/1
DC11:H.N4/1 2.94 370:I/1 2.6 GLU262:I.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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