|
Nucleic atom
|
dist
|
Protein atom
|
|
DC4:A.OP1/1
|
2.82
|
PHE81:C.N/1
|
|
DC4:A.OP2/1
|
2.57
|
TYR57:C.OH/1
|
|
DC5:A.OP2/1
|
2.78
|
TYR68:C.OH/1
|
|
DG6:A.N7/1
|
2.95
|
ARG65:C.NE/1
|
|
DG6:A.O6/1
|
2.88
|
ARG65:C.NH2/1
|
|
DG7:A.N7/1
|
2.99
|
ARG62:C.NH2/1
|
|
DG7:A.O6/1
|
2.76
|
ARG62:C.NE/1
|
|
DC4:B.OP1/1
|
2.93
|
LEU7:C.N/1
|
|
DC4:B.OP2/1
|
2.57
|
TYR67:C.OH/1
|
|
DC4:B.O3'/1
|
3.19
|
LYS50:C.NZ/1
|
|
DT5:B.OP1/1
|
2.83
|
LYS50:C.NZ/1
|
|
DT5:B.OP2/1
|
2.84
|
TRP46:C.NE1/1
|
|
DT6:B.OP1/1
|
2.88
|
LYS52:C.NZ/1
|
|
DT6:B.OP2/1
|
2.61
|
LYS59:C.NZ/1
|
|
DC8:B.N4/1
|
2.85
|
ASP58:C.OD1/1
|
|
DC8:B.N4/1
|
3.28
|
ASP58:C.OD2/1
|
|
DC4:D.OP1/1
|
2.82
|
PHE81:F.N/1
|
|
DC4:D.OP2/1
|
2.57
|
TYR57:F.OH/1
|
|
DC5:D.OP2/1
|
2.75
|
TYR68:F.OH/1
|
|
DG6:D.N7/1
|
2.96
|
ARG65:F.NE/1
|
|
DG6:D.O6/1
|
2.87
|
ARG65:F.NH2/1
|
|
DG7:D.N7/1
|
2.99
|
ARG62:F.NH2/1
|
|
DG7:D.O6/1
|
2.76
|
ARG62:F.NE/1
|
|
DC4:E.OP1/1
|
2.93
|
LEU7:F.N/1
|
|
DC4:E.OP2/1
|
2.56
|
TYR67:F.OH/1
|
|
DC4:E.O3'/1
|
3.21
|
LYS50:F.NZ/1
|
|
DT5:E.OP1/1
|
2.84
|
LYS50:F.NZ/1
|
|
DT5:E.OP2/1
|
2.84
|
TRP46:F.NE1/1
|
|
DT6:E.OP1/1
|
2.89
|
LYS52:F.NZ/1
|
|
DT6:E.OP2/1
|
2.6
|
LYS59:F.NZ/1
|
|
DC8:E.N4/1
|
2.86
|
ASP58:F.OD1/1
|
|
DC8:E.N4/1
|
3.28
|
ASP58:F.OD2/1
|
|
|
|
Nucleic atom
|
d_n2w
|
water
|
d_p2w
|
Protein atom
|
|
DC4:A.N4/1
|
3.35
|
129:C/1
|
2.67
|
ASP58:C.OD1/1
|
|
DC5:A.OP2/1
|
2.59
|
22:A/1
|
2.97
|
TYR83:C.OH/1
|
|
DC5:A.N4/1
|
3.15
|
100:C/1
|
2.93
|
ASP58:C.OD1/1
|
|
DC5:A.N4/1
|
3.15
|
100:C/1
|
2.84
|
ARG65:C.NH2/1
|
|
DA3:B.OP2/1
|
3.08
|
140:C/1
|
2.57
|
TYR66:C.OH/1
|
|
DC4:B.OP1/1
|
2.66
|
16:B/1
|
2.8
|
LYS50:C.NZ/1
|
|
DT5:B.OP1/1
|
2.68
|
27:B/1
|
3.07
|
TRP46:C.O/1
|
|
DT5:B.OP2/1
|
2.85
|
101:C/1
|
2.72
|
LYS59:C.O/1
|
|
DT6:B.OP1/1
|
2.66
|
22:B/1
|
3.01
|
ASN54:C.ND2/1
|
|
DT6:B.OP2/1
|
2.81
|
25:B/1
|
2.88
|
ASN54:C.OD1/1
|
|
DC7:B.OP2/1
|
2.75
|
123:C/1
|
2.72
|
LYS59:C.NZ/1
|
|
DC7:B.N4/1
|
2.81
|
130:C/1
|
2.84
|
ASP58:C.O/1
|
|
DC7:B.N4/1
|
2.81
|
130:C/1
|
2.55
|
ASP58:C.OD2/1
|
|
DC8:B.N4/1
|
2.83
|
130:C/1
|
2.84
|
ASP58:C.O/1
|
|
DC8:B.N4/1
|
2.83
|
130:C/1
|
2.55
|
ASP58:C.OD2/1
|
|
DC4:D.N4/1
|
3.3
|
144:F/1
|
2.65
|
ASP58:F.OD1/1
|
|
DC5:D.OP2/1
|
2.55
|
119:D/1
|
2.94
|
TYR83:F.OH/1
|
|
DC5:D.N4/1
|
3.32
|
106:F/1
|
2.89
|
ASP58:F.OD1/1
|
|
DC5:D.N4/1
|
3.32
|
106:F/1
|
2.86
|
ARG65:F.NH2/1
|
|
DC4:E.OP1/1
|
2.72
|
15:E/1
|
2.85
|
LYS50:F.NZ/1
|
|
DT5:E.OP2/1
|
2.82
|
104:F/1
|
2.71
|
LYS59:F.O/1
|
|
DT6:E.OP1/1
|
2.55
|
19:E/1
|
3.11
|
ASN54:F.ND2/1
|
|
DT6:E.OP2/1
|
2.8
|
29:E/1
|
2.89
|
ASN54:F.OD1/1
|
|
DC7:E.OP2/1
|
2.61
|
18:E/1
|
2.83
|
LYS59:F.NZ/1
|
|
DC7:E.N4/1
|
2.87
|
105:F/1
|
2.78
|
ASP58:F.O/1
|
|
DC7:E.N4/1
|
2.87
|
105:F/1
|
2.52
|
ASP58:F.OD2/1
|
|
DC8:E.N4/1
|
2.83
|
105:F/1
|
2.78
|
ASP58:F.O/1
|
|
DC8:E.N4/1
|
2.83
|
105:F/1
|
2.52
|
ASP58:F.OD2/1
|
|
|
Hbonds:
Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Dist is distance from nucleic atom to protein atom in angstroms (Å).
W-Bridges:
W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Water is water molecule.
d_n2w is distance from nucleic atom to water molecule (Å).
d_p2w is distance from protein atom to water molecule (Å).
CluD:
CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
Core number is serial number of cluster.
Atoms is number of detected atoms in the cluster.
