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Nucleic atom dist Protein atom
DA202:U.N3/1 3.26 ARG22:G.NH1/1
DA203:U.O4'/1 2.72 ARG22:G.NH1/1
DC204:U.OP1/1 3.14 GLU23:G.OE2/1
DC205:U.OP1/1 2.5 SER29:J.OG/1
DG206:U.OP1/1 2.95 LYS28:J.NZ/1
DT207:U.O4/1 2.61 THR6:H.OG1/1
DG208:U.N7/1 3.26 ARG4:H.NH1/1
DG208:U.O6/1 3.25 ARG4:H.NH1/1
DG208:U.O6/1 3.05 ARG4:H.NH2/1
DT216:U.OP1/1 3.12 LYS28:K.N/1
DT216:U.OP1/1 2.49 LYS28:K.NZ/1
DT216:U.OP2/1 2.44 SER29:K.N/1
DT216:U.OP2/1 2.58 SER29:K.OG/1
DT216:U.O4/1 2.7 ARG4:K.NH2/1
DG217:U.OP2/1 2.89 THR6:L.N/1
DA203:V.OP2/1 2.46 THR8:K.OG1/1
DA203:V.N7/1 2.36 ARG4:L.NH2/1
DT204:V.OP1/1 2.59 LYS28:L.NZ/1
DG206:V.O6/1 3.18 ARG4:K.NH1/1
DT214:V.OP1/1 2.93 LYS28:H.N/1
DT214:V.OP2/1 2.45 SER29:H.N/1
DT214:V.OP2/1 2.61 SER29:H.OG/1
DT214:V.O4/1 2.91 ARG4:H.NH2/1
DG215:V.OP2/1 2.77 THR6:J.N/1
DC204:W.OP1/1 2.76 LYS2:G.NZ/1
DC205:W.OP1/1 3.02 SER29:G.OG/1
DC205:W.OP2/1 2.99 THR8:F.OG1/1
DG206:W.OP1/1 2.48 LYS28:G.NZ/1
DG206:W.N7/1 3.32 ARG4:G.NH2/1
DG208:W.N7/1 2.91 ARG4:F.NH1/1
DA215:W.OP2/1 2.53 THR8:E.OG1/1
DT216:W.OP1/1 2.84 LYS28:D.N/1
DT216:W.OP2/1 2.64 SER29:D.N/1
DT216:W.OP2/1 2.41 SER29:D.OG/1
DT216:W.O4/1 3.06 ARG4:D.NE/1
DT216:W.O4/1 3.31 ARG4:D.NH2/1
DG217:W.OP2/1 3.02 THR6:E.N/1
DA201:X.O5'/1 2.82 GLU23:B.OE2/1
DA201:X.N7/1 2.76 ARG22:B.NH1/1
DG202:X.OP1/1 2.89 LYS2:E.NZ/1
DA203:X.OP1/1 2.72 SER29:E.OG/1
DA203:X.OP2/1 2.82 THR8:D.OG1/1
DA203:X.OP2/1 3.01 SER29:E.OG/1
DA203:X.N7/1 2.89 ARG4:E.NH1/1
DT205:X.O4/1 2.97 THR6:D.OG1/1
DG206:X.O6/1 3.22 ARG4:D.NH2/1
DG213:X.OP2/1 2.82 THR8:G.OG1/1
DT214:X.OP1/1 3.31 LYS28:F.N/1
DT214:X.OP2/1 2.66 SER29:F.N/1
DT214:X.OP2/1 2.82 SER29:F.OG/1
DT214:X.O4/1 3.03 ARG4:F.NH2/1
DG215:X.OP2/1 2.98 THR6:G.N/1
DA217:X.N6/1 3.19 ARG4:G.NH1/1
DA202:Y.N3/1 3.49 ARG22:E.NH1/1
DA203:Y.O4'/1 2.96 ARG22:E.NH1/1
DC204:Y.OP1/1 2.88 LYS2:B.NZ/1
DC205:Y.OP1/1 2.89 SER29:B.OG/1
DC205:Y.OP2/1 2.75 THR8:A.OG1/1
DG206:Y.OP1/1 2.71 LYS28:B.NZ/1
DG208:Y.O6/1 3.13 ARG4:A.NH2/1
DA215:Y.OP2/1 2.57 THR8:B.OG1/1
DT216:Y.OP1/1 3.06 LYS28:A.N/1
DT216:Y.OP2/1 2.73 SER29:A.N/1
DT216:Y.OP2/1 2.49 SER29:A.OG/1
DT216:Y.O4/1 3.34 ARG4:A.NE/1
DG217:Y.OP2/1 2.96 THR6:B.N/1
DA201:Z.O4'/1 2.93 ARG22:E.NH1/1
DG202:Z.OP1/1 2.99 LYS2:B.NZ/1
DA203:Z.OP1/1 2.86 SER29:B.OG/1
DA203:Z.OP2/1 2.76 THR8:A.OG1/1
DT204:Z.OP1/1 2.69 LYS28:B.NZ/1
DT204:Z.O4/1 2.61 ARG4:B.NH2/1
DG206:Z.O6/1 3.16 ARG4:A.NH2/1
DG213:Z.OP2/1 2.57 THR8:B.OG1/1
DT214:Z.OP1/1 3.08 LYS28:A.N/1
DT214:Z.OP2/1 2.76 SER29:A.N/1
DT214:Z.OP2/1 2.52 SER29:A.OG/1
DT214:Z.O4/1 3.37 ARG4:A.NE/1
DG215:Z.OP2/1 2.96 THR6:B.N/1
DA202:U.N3/2 3.26 ARG22:G.NH1/2
DA203:U.O4'/2 2.72 ARG22:G.NH1/2
DC204:U.OP1/2 3.14 GLU23:G.OE2/2
DC205:U.OP1/2 2.5 SER29:J.OG/2
DG206:U.OP1/2 2.95 LYS28:J.NZ/2
DT207:U.O4/2 2.61 THR6:H.OG1/2
DG208:U.N7/2 3.26 ARG4:H.NH1/2
DG208:U.O6/2 3.25 ARG4:H.NH1/2
DG208:U.O6/2 3.05 ARG4:H.NH2/2
DT216:U.OP1/2 3.12 LYS28:K.N/2
DT216:U.OP1/2 2.49 LYS28:K.NZ/2
DT216:U.OP2/2 2.44 SER29:K.N/2
DT216:U.OP2/2 2.58 SER29:K.OG/2
DT216:U.O4/2 2.7 ARG4:K.NH2/2
DG217:U.OP2/2 2.89 THR6:L.N/2
DA203:V.OP2/2 2.46 THR8:K.OG1/2
DA203:V.N7/2 2.36 ARG4:L.NH2/2
DT204:V.OP1/2 2.59 LYS28:L.NZ/2
DG206:V.O6/2 3.18 ARG4:K.NH1/2
DT214:V.OP1/2 2.93 LYS28:H.N/2
DT214:V.OP2/2 2.45 SER29:H.N/2
DT214:V.OP2/2 2.61 SER29:H.OG/2
DT214:V.O4/2 2.91 ARG4:H.NH2/2
DG215:V.OP2/2 2.77 THR6:J.N/2
DC204:W.OP1/2 2.76 LYS2:G.NZ/2
DC205:W.OP1/2 3.02 SER29:G.OG/2
DC205:W.OP2/2 2.99 THR8:F.OG1/2
DG206:W.OP1/2 2.48 LYS28:G.NZ/2
DG206:W.N7/2 3.32 ARG4:G.NH2/2
DG208:W.N7/2 2.91 ARG4:F.NH1/2
DA215:W.OP2/2 2.53 THR8:E.OG1/2
DT216:W.OP1/2 2.84 LYS28:D.N/2
DT216:W.OP2/2 2.64 SER29:D.N/2
DT216:W.OP2/2 2.41 SER29:D.OG/2
DT216:W.O4/2 3.06 ARG4:D.NE/2
DT216:W.O4/2 3.31 ARG4:D.NH2/2
DG217:W.OP2/2 3.02 THR6:E.N/2
DA201:X.O5'/2 2.82 GLU23:B.OE2/2
DA201:X.N7/2 2.76 ARG22:B.NH1/2
DG202:X.OP1/2 2.89 LYS2:E.NZ/2
DA203:X.OP1/2 2.72 SER29:E.OG/2
DA203:X.OP2/2 2.82 THR8:D.OG1/2
DA203:X.OP2/2 3.01 SER29:E.OG/2
DA203:X.N7/2 2.89 ARG4:E.NH1/2
DT205:X.O4/2 2.97 THR6:D.OG1/2
DG206:X.O6/2 3.22 ARG4:D.NH2/2
DG213:X.OP2/2 2.82 THR8:G.OG1/2
DT214:X.OP1/2 3.31 LYS28:F.N/2
DT214:X.OP2/2 2.66 SER29:F.N/2
DT214:X.OP2/2 2.82 SER29:F.OG/2
DT214:X.O4/2 3.03 ARG4:F.NH2/2
DG215:X.OP2/2 2.98 THR6:G.N/2
DA217:X.N6/2 3.19 ARG4:G.NH1/2
DA202:Y.N3/2 3.49 ARG22:E.NH1/2
DA203:Y.O4'/2 2.96 ARG22:E.NH1/2
DC204:Y.OP1/2 2.88 LYS2:B.NZ/2
DC205:Y.OP1/2 2.89 SER29:B.OG/2
DC205:Y.OP2/2 2.75 THR8:A.OG1/2
DG206:Y.OP1/2 2.71 LYS28:B.NZ/2
DG208:Y.O6/2 3.13 ARG4:A.NH2/2
DA215:Y.OP2/2 2.57 THR8:B.OG1/2
DT216:Y.OP1/2 3.06 LYS28:A.N/2
DT216:Y.OP2/2 2.73 SER29:A.N/2
DT216:Y.OP2/2 2.49 SER29:A.OG/2
DT216:Y.O4/2 3.34 ARG4:A.NE/2
DG217:Y.OP2/2 2.96 THR6:B.N/2
DA201:Z.O4'/2 2.93 ARG22:E.NH1/2
DG202:Z.OP1/2 2.99 LYS2:B.NZ/2
DA203:Z.OP1/2 2.86 SER29:B.OG/2
DA203:Z.OP2/2 2.76 THR8:A.OG1/2
DT204:Z.OP1/2 2.69 LYS28:B.NZ/2
DT204:Z.O4/2 2.61 ARG4:B.NH2/2
DG206:Z.O6/2 3.16 ARG4:A.NH2/2
DG213:Z.OP2/2 2.57 THR8:B.OG1/2
DT214:Z.OP1/2 3.08 LYS28:A.N/2
DT214:Z.OP2/2 2.76 SER29:A.N/2
DT214:Z.OP2/2 2.52 SER29:A.OG/2
DT214:Z.O4/2 3.37 ARG4:A.NE/2
DG215:Z.OP2/2 2.96 THR6:B.N/2
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Nucleic atom d_n2w water d_p2w Protein atom
DG215:X.OP1/1 2.71 2003:X/1 2.81 LYS3:G.NZ/1
DG215:X.OP1/2 2.71 2003:X/2 2.81 LYS3:G.NZ/2
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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