Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA2:C.O5'/1 3.22 ARG226:B.NH2/1
DA3:C.OP2/1 2.86 SER223:B.N/1
DG4:C.N7/1 2.86 ASN185:B.N/1
DG4:C.O6/1 2.88 GLY184:B.N/1
DA5:C.OP1/1 3.05 LYS119:A.NZ/1
DA5:C.OP2/1 2.59 THR111:A.OG1/1
DA5:C.N7/1 2.94 ASN185:B.ND2/1
DA5:C.N6/1 2.9 ASN185:B.OD1/1
DA5:C.N3/1 3.04 ASN70:A.ND2/1
TSP6:C.OP1/1 2.92 SER112:A.OG/1
DT8:C.OP1/1 2.85 THR93:A.N/1
DT8:C.O4/1 2.7 THR186:A.OG1/1
DC9:C.OP1/1 2.59 THR37:A.OG1/1
DC9:C.OP2/1 2.54 THR94:A.OG1/1
DC9:C.N4/1 2.83 GLY182:A.O/1
DT10:C.OP1/1 3.29 GLN69:B.N/1
DT10:C.OP1/1 3.34 GLN69:B.NE2/1
DT10:C.OP2/1 2.7 TYR95:A.OH/1
DT10:C.O3'/1 3.16 ASN70:B.ND2/1
DA3:D.OP2/1 2.83 SER223:A.N/1
DG4:D.N7/1 3 ASN185:A.N/1
DG4:D.O6/1 3.13 GLY184:A.N/1
DA5:D.OP2/1 2.7 THR111:B.OG1/1
DA5:D.N7/1 2.95 ASN185:A.ND2/1
DA5:D.N6/1 2.91 ASN185:A.OD1/1
TSP6:D.OP1/1 2.78 SER112:B.OG/1
DA7:D.OP2/1 3.25 LYS92:B.NZ/1
DT8:D.OP1/1 2.75 THR93:B.N/1
DT8:D.O4/1 2.77 THR186:B.OG1/1
DC9:D.OP1/1 2.44 THR37:B.OG1/1
DC9:D.OP2/1 2.74 THR94:B.OG1/1
DC9:D.O2/1 2.7 ASN70:A.ND2/1
DC9:D.N4/1 2.76 GLY182:B.O/1
DT10:D.OP1/1 3.39 GLN69:A.N/1
DT10:D.OP2/1 2.49 TYR95:B.OH/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA3:C.N6/1 3.03 680:B/1 3.03 ALA181:B.O/1
DA5:C.OP2/1 2.8 632:A/1 2.63 THR187:A.OG1/1
TSP6:C.OP1/1 2.6 35:C/1 2.95 GLY109:A.N/1
TSP6:C.OP2/1 2.71 19:C/1 2.82 THR186:A.O/1
TSP6:C.OP2/1 2.91 17:C/1 2.95 ASN188:A.ND2/1
DA7:C.OP1/1 2.51 35:C/1 2.95 GLY109:A.N/1
DA7:C.OP1/1 2.91 17:C/1 2.95 ASN188:A.ND2/1
DA7:C.OP2/1 2.67 27:C/1 2.77 ASP90:A.OD1/1
DA7:C.OP2/1 2.53 28:C/1 2.75 ASP90:A.OD2/1
DA7:C.OP2/1 2.67 27:C/1 2.95 LYS92:A.NZ/1
DT8:C.OP1/1 2.75 33:C/1 3.04 ILE91:A.O/1
DT8:C.OP2/1 2.95 14:C/1 3.07 THR106:A.N/1
DC9:C.OP2/1 2.52 15:C/1 3.03 LYS104:A.O/1
DA2:D.OP1/1 3.08 680:A/1 2.38 TYR219:A.OH/1
DA2:D.OP1/1 3.08 680:A/1 2.73 ASN231:A.O/1
DA5:D.OP2/1 2.44 193:D/1 2.91 THR187:B.OG1/1
TSP6:D.OP1/1 2.74 100:D/1 3.15 GLY109:B.N/1
TSP6:D.OP2/1 2.75 102:D/1 2.88 THR186:B.O/1
TSP6:D.OP2/1 2.85 191:D/1 2.99 ASN188:B.ND2/1
DA7:D.OP1/1 2.53 100:D/1 3.15 GLY109:B.N/1
DA7:D.OP2/1 2.43 89:D/1 2.65 ASP90:B.OD1/1
DA7:D.OP2/1 2.8 625:B/1 2.96 ASP90:B.OD2/1
DA7:D.OP2/1 2.8 625:B/1 2.76 ILE91:B.O/1
DA7:D.OP2/1 2.8 625:B/1 2.91 LYS92:B.NZ/1
DT8:D.OP2/1 2.43 94:D/1 3.07 THR106:B.N/1
DC9:D.OP2/1 2.89 627:B/1 2.77 LYS104:B.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text