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Nucleic atom dist Protein atom
DA5:I.OP2/1 2.71 ALA24:G.O/1
DA11:I.OP2/1 3.02 LYS74:A.NZ/1
DA19:I.OP1/1 2.91 SER56:B.N/1
DT20:I.OP1/1 3.26 ILE54:B.N/1
DA30:I.OP2/1 3.04 ARG32:A.NH1/1
DG31:I.OP1/1 2.9 ARG17:A.N/1
DT32:I.OP1/1 3.31 LYS15:A.N/1
DG40:I.OP1/1 3.16 SER87:B.N/1
DG40:I.OP1/1 3.11 THR88:B.N/1
DG40:I.OP2/1 3.04 SER87:B.N/1
DA41:I.OP2/1 3.11 ARG86:B.NH2/1
DC47:I.OP2/1 2.64 LYS27:F.NZ/1
DC50:I.OP2/1 2.91 SER86:C.N/1
DA51:I.OP1/1 2.78 ARG72:C.NH1/1
DA51:I.OP1/1 2.62 PHE84:C.N/1
DA51:I.OP2/1 2.88 ARG72:C.NH2/1
DC60:I.OP1/1 3 ARG36:D.NH2/1
DC60:I.OP2/1 2.98 ARG36:D.NH1/1
DG68:I.OP1/1 2.77 ARG42:C.NE/1
DG68:I.OP1/1 2.93 ARG42:C.NH2/1
DG70:I.OP1/1 2.83 VAL117:C.N/1
DG70:I.OP1/1 2.49 THR118:C.OG1/1
DT80:I.OP2/1 2.93 GLY48:H.N/1
DG81:I.OP1/1 2.61 ILE46:H.N/1
DG81:I.O3'/1 3.37 GLY44:G.N/1
DA82:I.OP1/1 2.88 GLY44:G.N/1
DA82:I.OP1/1 2.77 VAL46:G.N/1
DA82:I.OP1/1 3.01 ALA47:G.N/1
DA82:I.N3/1 3.32 ARG40:G.NH2/1
DA83:I.OP1/1 2.7 TYR41:G.N/1
DA83:I.O4'/1 3.15 ARG40:G.NH2/1
DT91:I.OP1/1 2.83 LYS64:G.N/1
DT91:I.OP1/1 2.81 LYS64:G.N/1
DT91:I.OP2/1 2.71 LEU65:G.N/1
DG100:I.OP2/1 3.21 LYS79:H.NZ/1
DC101:I.OP1/1 2.73 LYS79:H.N/1
DC101:I.OP1/1 2.91 THR80:H.N/1
DC101:I.OP1/1 2.73 THR80:H.OG1/1
DG103:I.OP1/1 2.48 SER32:B.OG/1
DG103:I.O5'/1 3.01 LYS31:B.O/1
DG103:I.N2/1 2.73 ARG29:B.NH2/1
DG103:I.N3/1 2.76 ARG29:B.NH1/1
DT105:I.OP1/1 2.41 LYS28:B.NZ/1
DA111:I.OP1/1 2.94 ALA45:E.N/1
DT112:I.OP1/1 2.76 ARG35:E.NH1/1
DT112:I.OP1/1 3.24 VAL43:E.N/1
DT112:I.OP2/1 3 ARG35:E.NH2/1
DG122:I.OP1/1 3.13 ARG29:E.NH2/1
DG122:I.OP1/1 3.06 SER36:F.N/1
DG122:I.OP1/1 3.07 SER36:F.O/1
DT123:I.OP1/1 3.25 LYS34:F.N/1
DA124:I.OP1/1 3.22 ARG29:F.NH1/1
DC132:I.OP1/1 3.16 THR76:E.N/1
DC132:I.OP1/1 2.74 ARG77:E.N/1
DC132:I.OP2/1 2.95 THR76:E.N/1
DT142:I.OP2/1 3.29 HIS123:E.ND1/1
DG144:I.OP1/1 2.73 ARG42:C.N/1
DG144:I.OP1/1 2.75 THR45:C.OG1/1
DA165:J.OP1/1 2.95 SER56:F.N/1
DA165:J.OP2/1 2.76 SER56:F.OG/1
DA176:J.OP2/1 3.28 ARG32:E.NH1/1
DG177:J.OP1/1 2.85 ARG17:E.N/1
DG177:J.OP2/1 3.07 ARG17:E.NE/1
DT178:J.OP1/1 2.41 ALA14:E.O/1
DG186:J.OP1/1 3.12 THR88:F.N/1
DG186:J.OP2/1 2.77 SER87:F.N/1
DA187:J.OP1/1 3.08 ARG86:F.NH1/1
DA187:J.OP2/1 2.73 ARG86:F.NH2/1
DT191:J.O2/1 2.62 ARG29:B.NH2/1
DG192:J.O4'/1 2.9 ARG29:B.NE/1
DC196:J.OP2/1 3.01 SER86:G.N/1
DA197:J.OP1/1 2.68 ARG72:G.NH1/1
DA197:J.OP1/1 3.13 PHE84:G.N/1
DA197:J.OP2/1 2.97 ARG72:G.NH2/1
DA207:J.OP1/1 2.93 ARG63:G.NH1/1
DA207:J.OP1/1 2.94 ARG36:H.NH2/1
DA207:J.OP2/1 2.86 ARG36:H.NH1/1
DC215:J.OP1/1 2.83 ARG42:G.NE/1
DC215:J.OP1/1 2.78 ARG42:G.NH2/1
DG217:J.OP1/1 2.84 VAL117:G.N/1
DG217:J.OP1/1 2.75 THR118:G.OG1/1
DG227:J.OP2/1 2.9 GLY48:D.N/1
DA228:J.OP1/1 2.46 ILE46:D.N/1
DA228:J.OP2/1 2.5 ARG35:D.NH2/1
DA228:J.O3'/1 3.05 GLY44:C.N/1
DA229:J.OP1/1 2.91 GLY44:C.N/1
DA229:J.OP1/1 2.74 VAL46:C.N/1
DA229:J.OP1/1 3.12 ALA47:C.N/1
DA229:J.N3/1 2.65 ARG40:C.NH2/1
DC230:J.OP1/1 2.9 TYR41:C.N/1
DC230:J.O4'/1 3.04 ARG40:C.NH1/1
DT237:J.OP1/1 3.13 ARG63:C.NH2/1
DT237:J.OP1/1 2.58 ARG69:C.NH2/1
DT237:J.OP1/1 2.78 ARG23:D.NH2/1
DT238:J.OP1/1 3.2 LYS64:C.N/1
DT238:J.OP2/1 3.02 LEU65:C.N/1
DG246:J.OP1/1 2.84 LYS79:D.NZ/1
DC247:J.OP1/1 2.72 LYS79:D.N/1
DC247:J.OP1/1 2.82 THR80:D.OG1/1
DA248:J.OP2/1 3.16 ARG78:D.NH1/1
DG249:J.OP1/1 2.95 SER32:F.N/1
DT250:J.OP1/1 2.85 ARG29:F.O/1
DA257:J.OP1/1 3.05 ALA45:A.N/1
DT258:J.OP1/1 3.02 ARG35:A.NH1/1
DT258:J.OP1/1 3.43 VAL43:A.N/1
DT258:J.OP2/1 3.23 ARG35:A.NH1/1
DT258:J.OP2/1 3.23 ARG35:A.NH2/1
DT265:J.OP2/1 3.2 LYS5:A.NZ/1
DG268:J.OP1/1 3.06 ARG29:A.NH1/1
DG268:J.OP1/1 3.17 ARG29:A.NH2/1
DG268:J.OP1/1 3.18 SER36:B.N/1
DT269:J.OP1/1 2.73 LYS34:B.N/1
DC278:J.OP1/1 2.97 THR76:A.N/1
DC278:J.OP1/1 2.74 ARG77:A.N/1
DC278:J.OP2/1 3.12 THR76:A.N/1
DG290:J.OP1/1 2.82 ARG42:G.N/1
DG290:J.OP1/1 2.55 THR45:G.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA19:I.OP1/1 2.74 476:I/1 3.19 SER56:B.OG/1
DA19:I.OP1/1 2.74 476:I/1 3.24 LYS57:B.N/1
DT20:I.OP2/1 2.81 136:B/1 2.66 ILE54:B.O/1
DG31:I.OP1/1 2.69 499:I/1 3.15 SER18:A.N/1
DG31:I.OP1/1 2.69 499:I/1 2.9 SER18:A.OG/1
DG31:I.OP1/1 2.69 499:I/1 3.14 GLY28:A.N/1
DC50:I.OP1/1 2.57 496:I/1 3.29 GLN85:C.NE2/1
DC50:I.OP2/1 2.9 479:I/1 3.12 SER86:C.OG/1
DC50:I.OP2/1 2.9 479:I/1 3.01 SER87:C.N/1
DC50:I.OP2/1 2.9 479:I/1 3.11 SER87:C.OG/1
DG81:I.OP2/1 2.63 104:H/1 2.35 ILE46:H.O/1
DG81:I.OP2/1 2.63 104:H/1 2.59 TYR51:H.OH/1
DA102:I.OP1/1 2.82 485:I/1 2.84 GLN85:G.NE2/1
DG122:I.OP2/1 2.83 507:I/1 2.94 SER36:F.O/1
DG122:I.OP2/1 2.83 507:I/1 3 ILE39:F.N/1
DT154:J.OP1/1 3.02 163:C/1 2.89 ARG49:C.O/1
DT167:J.OP1/1 3.19 138:F/1 2.76 TYR42:F.OH/1
DG177:J.OP1/1 2.84 488:J/1 2.96 SER18:E.N/1
DG177:J.OP1/1 2.84 488:J/1 3.15 GLY28:E.N/1
DC196:J.OP2/1 2.94 466:G/1 2.86 SER86:G.OG/1
DC196:J.OP2/1 2.94 466:G/1 2.93 SER87:G.N/1
DT208:J.OP2/1 2.38 470:J/1 3.02 LYS31:H.N/1
DA228:J.OP1/1 2.5 484:J/1 3.11 ARG35:D.NH1/1
DA228:J.OP1/1 2.5 484:J/1 3.15 ARG39:D.NH1/1
DA228:J.OP1/1 2.5 484:J/1 2.58 ARG39:D.NH2/1
DA228:J.OP1/1 2.5 484:J/1 3.06 LYS44:D.O/1
DA228:J.OP2/1 2.99 257:D/1 2.57 ILE46:D.O/1
DA228:J.OP2/1 2.99 257:D/1 2.39 TYR51:D.OH/1
DC230:J.O2/1 3 145:C/1 2.39 ARG40:C.NH1/1
DG268:J.OP2/1 2.75 471:J/1 2.77 SER36:B.O/1
DG268:J.OP2/1 2.75 471:J/1 2.76 ILE39:B.N/1
DC278:J.OP1/1 2.54 485:A/1 2.45 ARG77:A.O/1
DA279:J.OP1/1 2.78 509:J/1 3 LYS75:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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