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Nucleic atom dist Protein atom
G3:T.O2'/1 3.15 ASN443:A.ND2/1
G10:T.O2'/1 2.98 GLU636:A.OE2/1
C11:T.O2'/1 2.78 GLN640:A.OE1/1
C11:T.O2/1 2.55 GLN640:A.NE2/1
U12:T.OP1/1 2.75 ARG632:A.NE/1
U12:T.OP1/1 2.71 ARG632:A.NH2/1
U12:T.O2'/1 2.69 SER624:A.O/1
C13:T.OP1/1 2.84 ASP626:A.N/1
C13:T.OP2/1 2.9 ARG632:A.NH2/1
A23:T.O2'/1 2.53 ASN710:A.OD1/1
G24:T.O2'/1 2.81 GLN709:A.OE1/1
G24:T.O2'/1 3.4 ASN713:A.ND2/1
G24:T.N2/1 3.42 GLN640:A.NE2/1
U33:T.OP1/1 3.08 LYS823:A.NZ/1
A35:T.OP2/1 2.67 TYR729:A.OH/1
A35:T.N7/1 3.08 LYS725:A.NZ/1
A35:T.N6/1 3.33 SER717:A.OG/1
A38:T.O3'/1 2.73 ASN650:A.OD1/1
A38:T.O2'/1 3.01 ASN650:A.OD1/1
G39:T.OP1/1 2.77 LYS647:A.NZ/1
G40:T.OP1/1 2.64 SER717:A.OG/1
G40:T.OP1/1 3.03 ASN718:A.OD1/1
G41:T.OP1/1 3.11 ARG805:A.NH2/1
G41:T.O2'/1 2.73 GLU813:A.OE2/1
G41:T.N3/1 3.39 GLU813:A.OE2/1
G68:T.O2'/1 2.68 GLY593:A.O/1
G69:T.OP1/1 2.95 LYS595:A.N/1
G69:T.O2'/1 2.84 ASP630:A.OD2/1
C70:T.O2'/1 3.32 ARG440:A.NH2/1
C70:T.O2'/1 3.25 SER556:A.OG/1
C70:T.O2/1 2.94 ARG440:A.NH2/1
C71:T.O2'/1 2.81 ARG560:A.NE/1
C71:T.O2'/1 3.21 ARG560:A.NH2/1
C72:T.O5'/1 3.11 ARG560:A.NE/1
C74:T.OP1/1 2.5 ASP333:A.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
C4:T.O2'/1 2.47 1274:T/1 2.87 ARG440:A.NH1/1
U5:T.O2'/1 3.03 2055:A/1 2.87 LEU628:A.O/1
C13:T.OP1/1 3.18 2009:A/1 2.83 ARG632:A.N/1
C13:T.O3'/1 2.72 1322:T/1 3.02 ASN703:A.OD1/1
C13:T.O2'/1 2.69 1322:T/1 3.02 ASN703:A.OD1/1
A14:T.OP2/1 3.02 2198:A/1 2.72 ASP626:A.OD2/1
A23:T.N3/1 2.87 1996:A/1 2.67 GLN706:A.NE2/1
A23:T.N3/1 2.87 1996:A/1 2.92 ASN710:A.ND2/1
G24:T.N2/1 3.22 2044:A/1 2.75 GLN709:A.NE2/1
G24:T.N3/1 2.84 2044:A/1 3.18 GLN706:A.NE2/1
G24:T.N3/1 2.84 2044:A/1 2.75 GLN709:A.NE2/1
C25:T.OP1/1 2.62 1233:T/1 2.77 ASN718:A.ND2/1
C25:T.O3'/1 3.04 2021:A/1 2.84 ASP643:A.O/1
A35:T.OP1/1 2.93 2028:A/1 2.68 LYS725:A.NZ/1
A35:T.O2'/1 2.8 2144:A/1 2.54 ASN650:A.ND2/1
A35:T.O2'/1 2.8 2144:A/1 2.65 ARG653:A.NH1/1
A35:T.N6/1 2.69 1212:T/1 3.03 SER717:A.O/1
A35:T.N6/1 2.69 1212:T/1 3.08 LYS725:A.NZ/1
A35:T.N3/1 2.77 2144:A/1 2.54 ASN650:A.ND2/1
A35:T.N3/1 2.77 2144:A/1 2.65 ARG653:A.NH1/1
G39:T.O2'/1 2.46 1276:T/1 2.52 ASP722:A.OD2/1
G39:T.O2'/1 3.04 1212:T/1 3.08 LYS725:A.NZ/1
G39:T.O2'/1 2.46 1276:T/1 3.12 LYS725:A.NZ/1
G40:T.O4'/1 3.16 1276:T/1 2.52 ASP722:A.OD2/1
G41:T.OP1/1 2.58 1237:T/1 3.16 ARG805:A.NH1/1
G41:T.O2'/1 2.8 2008:A/1 2.8 ASN809:A.O/1
G41:T.O2'/1 2.8 2008:A/1 2.75 ARG816:A.NH2/1
G68:T.O2'/1 2.89 2075:A/1 2.78 GLY593:A.O/1
G68:T.N2/1 2.97 2139:A/1 2.61 ASP630:A.OD2/1
G69:T.O4'/1 2.82 2139:A/1 2.61 ASP630:A.OD2/1
A73:T.O3'/1 2.76 1282:T/1 3.02 HIS314:A.O/1
A73:T.O2'/1 2.45 1282:T/1 3.02 HIS314:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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