Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT5:X.OP1/1 2.47 THR261:A.OG1/1
DC6:X.OP1/1 3.38 LEU260:A.N/1
DC7:X.OP1/1 2.88 ARG148:A.NH1/1
DC7:X.OP2/1 3.26 ARG148:A.NH2/1
DA11:X.N6/1 2.34 GLU237:A.OE2/1
DG10:Y.OP1/1 3.11 SER265:A.OG/1
DC11:Y.O5'/1 2.71 TYR208:A.OH/1
DC11:Y.O4'/1 2.81 ASN205:A.O/1
DA5:Z.OP1/1 2.54 VAL123:A.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text